Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF220Q5VTB9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF220Q5VTB9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF220Q5VTB9 SNX5-217ENST00000606557 1087 ntBASIC20.84■□□□□ 0.93
RNF220Q5VTB9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF220Q5VTB9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF220Q5VTB9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF220Q5VTB9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RNF220Q5VTB9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RNF220Q5VTB9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF220Q5VTB9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF220Q5VTB9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF220Q5VTB9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF220Q5VTB9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF220Q5VTB9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF220Q5VTB9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.83■□□□□ 0.92
RNF220Q5VTB9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF220Q5VTB9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF220Q5VTB9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF220Q5VTB9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF220Q5VTB9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF220Q5VTB9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF220Q5VTB9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF220Q5VTB9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 LINC01521-201ENST00000504184 1943 ntBASIC20.78■□□□□ 0.92
RNF220Q5VTB9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF220Q5VTB9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.77■□□□□ 0.92
RNF220Q5VTB9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms