Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
KRTCAP3Q53RY4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
KRTCAP3Q53RY4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 AC011767.1-201ENST00000617410 1153 ntBASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 AC005224.4-201ENST00000583262 1652 ntBASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
KRTCAP3Q53RY4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 AC006970.2-201ENST00000450065 779 ntBASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
KRTCAP3Q53RY4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRTCAP3Q53RY4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRTCAP3Q53RY4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.53■□□□□ 0.72
KRTCAP3Q53RY4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.53■□□□□ 0.72
KRTCAP3Q53RY4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
KRTCAP3Q53RY4 KRT87P-202ENST00000534226 1464 ntBASIC19.53■□□□□ 0.72
KRTCAP3Q53RY4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
KRTCAP3Q53RY4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
KRTCAP3Q53RY4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
KRTCAP3Q53RY4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.5■□□□□ 0.71
KRTCAP3Q53RY4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
KRTCAP3Q53RY4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms