Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDC42P60953 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.84■□□□□ 0.77
CDC42P60953 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CDC42P60953 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.84■□□□□ 0.77
CDC42P60953 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.84■□□□□ 0.77
CDC42P60953 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.84■□□□□ 0.77
CDC42P60953 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDC42P60953 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42P60953 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CDC42P60953 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42P60953 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.83■□□□□ 0.77
CDC42P60953 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDC42P60953 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42P60953 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42P60953 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42P60953 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42P60953 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42P60953 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42P60953 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDC42P60953 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CDC42P60953 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.82■□□□□ 0.76
CDC42P60953 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42P60953 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42P60953 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.82■□□□□ 0.76
CDC42P60953 DUX4L18-201ENST00000553347 1267 ntBASIC19.82■□□□□ 0.76
CDC42P60953 BHLHE23-202ENST00000612929 1109 ntBASIC19.82■□□□□ 0.76
CDC42P60953 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42P60953 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42P60953 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.82■□□□□ 0.76
CDC42P60953 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.82■□□□□ 0.76
CDC42P60953 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDC42P60953 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDC42P60953 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42P60953 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42P60953 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42P60953 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDC42P60953 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42P60953 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42P60953 SNX5-217ENST00000606557 1087 ntBASIC19.81■□□□□ 0.76
CDC42P60953 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42P60953 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42P60953 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDC42P60953 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CDC42P60953 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 AC074183.2-201ENST00000623112 922 ntBASIC19.8■□□□□ 0.76
CDC42P60953 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDC42P60953 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.8■□□□□ 0.76
CDC42P60953 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.8■□□□□ 0.76
CDC42P60953 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDC42P60953 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.8■□□□□ 0.76
CDC42P60953 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDC42P60953 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDC42P60953 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42P60953 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CDC42P60953 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42P60953 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.79■□□□□ 0.76
CDC42P60953 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.79■□□□□ 0.76
CDC42P60953 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDC42P60953 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42P60953 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42P60953 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDC42P60953 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDC42P60953 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDC42P60953 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC42P60953 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
CDC42P60953 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.78■□□□□ 0.76
CDC42P60953 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC42P60953 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC42P60953 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDC42P60953 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDC42P60953 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDC42P60953 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.78■□□□□ 0.76
CDC42P60953 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms