Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CDH11P55287 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH11P55287 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH11P55287 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH11P55287 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDH11P55287 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
CDH11P55287 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDH11P55287 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.85■□□□□ 0.77
CDH11P55287 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH11P55287 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CDH11P55287 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.84■□□□□ 0.77
CDH11P55287 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH11P55287 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH11P55287 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH11P55287 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH11P55287 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH11P55287 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.83■□□□□ 0.77
CDH11P55287 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH11P55287 AC096631.2-201ENST00000436136 790 ntBASIC19.83■□□□□ 0.77
CDH11P55287 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CDH11P55287 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH11P55287 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CDH11P55287 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH11P55287 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH11P55287 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CDH11P55287 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CDH11P55287 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH11P55287 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CDH11P55287 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CDH11P55287 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CDH11P55287 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH11P55287 AC005703.6-201ENST00000623265 1329 ntBASIC19.82■□□□□ 0.76
CDH11P55287 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH11P55287 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH11P55287 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH11P55287 MIR638-201ENST00000385237 100 ntBASIC19.82■□□□□ 0.76
CDH11P55287 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH11P55287 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH11P55287 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH11P55287 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH11P55287 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH11P55287 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH11P55287 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH11P55287 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH11P55287 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH11P55287 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH11P55287 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CDH11P55287 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDH11P55287 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH11P55287 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH11P55287 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH11P55287 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH11P55287 AC110285.6-201ENST00000617652 491 ntBASIC19.8■□□□□ 0.76
CDH11P55287 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDH11P55287 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH11P55287 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH11P55287 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH11P55287 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDH11P55287 AL024507.2-201ENST00000606070 2574 ntBASIC19.79■□□□□ 0.76
CDH11P55287 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH11P55287 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH11P55287 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH11P55287 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH11P55287 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH11P55287 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH11P55287 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH11P55287 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH11P55287 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH11P55287 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CDH11P55287 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH11P55287 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH11P55287 SRD5A1P1-201ENST00000442297 786 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms