Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
UBE2AP49459 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 HES6-204ENST00000409182 863 ntTSL 2 BASIC13.73□□□□□ -0.21
UBE2AP49459 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC13.73□□□□□ -0.21
UBE2AP49459 KRT16P3-201ENST00000439127 1283 ntBASIC13.73□□□□□ -0.21
UBE2AP49459 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.73□□□□□ -0.21
UBE2AP49459 CLTA-206ENST00000466396 695 ntTSL 2 BASIC13.73□□□□□ -0.21
UBE2AP49459 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.73□□□□□ -0.21
UBE2AP49459 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.73□□□□□ -0.21
UBE2AP49459 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC13.73□□□□□ -0.21
UBE2AP49459 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.73□□□□□ -0.21
UBE2AP49459 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBE2AP49459 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBE2AP49459 FP325331.1-202ENST00000623531 1380 ntBASIC13.72□□□□□ -0.21
UBE2AP49459 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UBE2AP49459 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2AP49459 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2AP49459 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.72□□□□□ -0.21
UBE2AP49459 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UBE2AP49459 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBE2AP49459 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC13.72□□□□□ -0.21
UBE2AP49459 AC009086.3-201ENST00000623486 1008 ntBASIC13.72□□□□□ -0.21
UBE2AP49459 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2AP49459 COMT-203ENST00000403184 2217 ntTSL 2 BASIC13.72□□□□□ -0.21
UBE2AP49459 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBE2AP49459 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
UBE2AP49459 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC13.72□□□□□ -0.21
UBE2AP49459 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
UBE2AP49459 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.72□□□□□ -0.21
UBE2AP49459 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
UBE2AP49459 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC13.71□□□□□ -0.21
UBE2AP49459 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC13.71□□□□□ -0.21
UBE2AP49459 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
UBE2AP49459 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC13.71□□□□□ -0.21
UBE2AP49459 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
UBE2AP49459 MIR6724-1-201ENST00000616420 92 ntBASIC13.71□□□□□ -0.21
UBE2AP49459 MIR6724-2-201ENST00000616483 92 ntBASIC13.71□□□□□ -0.21
UBE2AP49459 MIR6724-4-201ENST00000617390 92 ntBASIC13.71□□□□□ -0.21
UBE2AP49459 MIR6724-3-201ENST00000622482 92 ntBASIC13.71□□□□□ -0.21
UBE2AP49459 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
UBE2AP49459 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC13.71□□□□□ -0.21
UBE2AP49459 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2AP49459 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.22
UBE2AP49459 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2AP49459 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.71□□□□□ -0.22
UBE2AP49459 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2AP49459 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC13.71□□□□□ -0.22
UBE2AP49459 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2AP49459 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC13.7□□□□□ -0.22
UBE2AP49459 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2AP49459 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2AP49459 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2AP49459 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2AP49459 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2AP49459 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
UBE2AP49459 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
UBE2AP49459 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2AP49459 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
UBE2AP49459 ESRRAP2-201ENST00000418437 1549 ntBASIC13.69□□□□□ -0.22
UBE2AP49459 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2AP49459 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
UBE2AP49459 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2AP49459 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2AP49459 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.69□□□□□ -0.22
UBE2AP49459 AL035685.1-201ENST00000636663 812 ntBASIC13.69□□□□□ -0.22
UBE2AP49459 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
UBE2AP49459 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UBE2AP49459 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2AP49459 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2AP49459 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UBE2AP49459 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2AP49459 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 AC009102.2-201ENST00000606772 1639 ntBASIC13.68□□□□□ -0.22
UBE2AP49459 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2AP49459 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
UBE2AP49459 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2AP49459 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2AP49459 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.68□□□□□ -0.22
UBE2AP49459 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2AP49459 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
UBE2AP49459 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 AL117332.1-201ENST00000622628 974 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms