Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.97■□□□□ 0.15
CKS2P33552 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.97■□□□□ 0.15
CKS2P33552 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
CKS2P33552 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CKS2P33552 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
CKS2P33552 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CKS2P33552 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CKS2P33552 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 AC018755.3-202ENST00000596210 929 ntBASIC15.96■□□□□ 0.15
CKS2P33552 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CKS2P33552 AC244015.2-201ENST00000616358 1861 ntBASIC15.96■□□□□ 0.15
CKS2P33552 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CKS2P33552 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CKS2P33552 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.96■□□□□ 0.14
CKS2P33552 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 AC092667.1-201ENST00000434301 2586 ntBASIC15.95■□□□□ 0.14
CKS2P33552 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CKS2P33552 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
CKS2P33552 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 CEP120-209ENST00000515110 606 ntTSL 3 BASIC15.95■□□□□ 0.14
CKS2P33552 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.95■□□□□ 0.14
CKS2P33552 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.95■□□□□ 0.14
CKS2P33552 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC15.95■□□□□ 0.14
CKS2P33552 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CKS2P33552 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CKS2P33552 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CKS2P33552 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC15.94■□□□□ 0.14
CKS2P33552 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
CKS2P33552 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.94■□□□□ 0.14
CKS2P33552 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CKS2P33552 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CKS2P33552 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CKS2P33552 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC15.94■□□□□ 0.14
CKS2P33552 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CKS2P33552 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CKS2P33552 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.93■□□□□ 0.14
CKS2P33552 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CKS2P33552 AC011551.1-201ENST00000614101 683 ntBASIC15.93■□□□□ 0.14
CKS2P33552 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CKS2P33552 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC15.93■□□□□ 0.14
CKS2P33552 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.93■□□□□ 0.14
CKS2P33552 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.93■□□□□ 0.14
CKS2P33552 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CKS2P33552 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CKS2P33552 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CKS2P33552 AIRN-201ENST00000601203 4374 ntBASIC15.92■□□□□ 0.14
CKS2P33552 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.92■□□□□ 0.14
CKS2P33552 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.92■□□□□ 0.14
CKS2P33552 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CKS2P33552 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CKS2P33552 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms