Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.55■■□□□ 1.84
COL4A5P29400 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL4A5P29400 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.55■■□□□ 1.84
COL4A5P29400 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.55■■□□□ 1.84
COL4A5P29400 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL4A5P29400 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL4A5P29400 SLC29A4P1-201ENST00000398760 971 ntBASIC26.55■■□□□ 1.84
COL4A5P29400 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
COL4A5P29400 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL4A5P29400 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.54■■□□□ 1.84
COL4A5P29400 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL4A5P29400 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL4A5P29400 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL4A5P29400 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL4A5P29400 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
COL4A5P29400 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
COL4A5P29400 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL4A5P29400 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
COL4A5P29400 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL4A5P29400 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL4A5P29400 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.53■■□□□ 1.84
COL4A5P29400 LINC00543-201ENST00000567234 1845 ntBASIC26.53■■□□□ 1.84
COL4A5P29400 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL4A5P29400 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.53■■□□□ 1.84
COL4A5P29400 AL353803.4-201ENST00000565882 1934 ntBASIC26.52■■□□□ 1.84
COL4A5P29400 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A5P29400 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A5P29400 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.52■■□□□ 1.84
COL4A5P29400 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A5P29400 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
COL4A5P29400 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
COL4A5P29400 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.52■■□□□ 1.84
COL4A5P29400 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
COL4A5P29400 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.52■■□□□ 1.84
COL4A5P29400 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.51■■□□□ 1.83
COL4A5P29400 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A5P29400 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A5P29400 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A5P29400 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A5P29400 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL4A5P29400 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A5P29400 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
COL4A5P29400 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
COL4A5P29400 AC073210.2-201ENST00000430369 194 ntBASIC26.5■■□□□ 1.83
COL4A5P29400 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A5P29400 RGMA-211ENST00000557420 989 ntTSL 3 BASIC26.5■■□□□ 1.83
COL4A5P29400 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.5■■□□□ 1.83
COL4A5P29400 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
COL4A5P29400 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A5P29400 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.5■■□□□ 1.83
COL4A5P29400 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.5■■□□□ 1.83
COL4A5P29400 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
COL4A5P29400 AC142381.3-201ENST00000568208 1670 ntBASIC26.5■■□□□ 1.83
COL4A5P29400 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL4A5P29400 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL4A5P29400 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
COL4A5P29400 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
COL4A5P29400 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.48■■□□□ 1.83
COL4A5P29400 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.48■■□□□ 1.83
COL4A5P29400 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 AF201337.1-201ENST00000520239 748 ntBASIC26.48■■□□□ 1.83
COL4A5P29400 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
COL4A5P29400 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.48■■□□□ 1.83
COL4A5P29400 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
COL4A5P29400 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.48■■□□□ 1.83
COL4A5P29400 DUSP8P3-201ENST00000399571 1760 ntBASIC26.47■■□□□ 1.83
COL4A5P29400 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A5P29400 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.47■■□□□ 1.83
COL4A5P29400 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.47■■□□□ 1.83
COL4A5P29400 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.47■■□□□ 1.83
COL4A5P29400 DUSP8P5-201ENST00000422884 1815 ntBASIC26.47■■□□□ 1.83
COL4A5P29400 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A5P29400 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A5P29400 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.47■■□□□ 1.83
COL4A5P29400 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A5P29400 AC133552.2-202ENST00000575694 574 ntBASIC26.47■■□□□ 1.83
COL4A5P29400 AP001160.3-201ENST00000601484 763 ntBASIC26.47■■□□□ 1.83
COL4A5P29400 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
COL4A5P29400 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
COL4A5P29400 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL4A5P29400 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.46■■□□□ 1.83
COL4A5P29400 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
COL4A5P29400 FAM201B-201ENST00000458407 597 ntBASIC26.46■■□□□ 1.83
COL4A5P29400 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC26.46■■□□□ 1.83
COL4A5P29400 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.46■■□□□ 1.83
COL4A5P29400 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.46■■□□□ 1.83
COL4A5P29400 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.46■■□□□ 1.83
COL4A5P29400 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
COL4A5P29400 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.45■■□□□ 1.83
COL4A5P29400 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms