Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.61■■□□□ 1.05
CHRM3P20309 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.61■■□□□ 1.05
CHRM3P20309 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRM3P20309 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRM3P20309 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.6■■□□□ 1.05
CHRM3P20309 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CHRM3P20309 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHRM3P20309 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.6■■□□□ 1.05
CHRM3P20309 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.59■■□□□ 1.05
CHRM3P20309 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.59■■□□□ 1.05
CHRM3P20309 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CHRM3P20309 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.59■■□□□ 1.05
CHRM3P20309 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CHRM3P20309 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.59■■□□□ 1.05
CHRM3P20309 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CHRM3P20309 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHRM3P20309 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHRM3P20309 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.58■■□□□ 1.05
CHRM3P20309 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHRM3P20309 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHRM3P20309 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHRM3P20309 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHRM3P20309 AC137767.1-201ENST00000602918 1920 ntBASIC21.58■■□□□ 1.04
CHRM3P20309 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHRM3P20309 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.58■■□□□ 1.04
CHRM3P20309 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHRM3P20309 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHRM3P20309 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRM3P20309 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRM3P20309 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
CHRM3P20309 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRM3P20309 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.57■■□□□ 1.04
CHRM3P20309 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CHRM3P20309 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.57■■□□□ 1.04
CHRM3P20309 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRM3P20309 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.57■■□□□ 1.04
CHRM3P20309 OR2I1P-207ENST00000453522 948 ntBASIC21.57■■□□□ 1.04
CHRM3P20309 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.57■■□□□ 1.04
CHRM3P20309 AC011298.3-201ENST00000615796 283 ntBASIC21.57■■□□□ 1.04
CHRM3P20309 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRM3P20309 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRM3P20309 AC139530.1-201ENST00000575312 1977 ntBASIC21.57■■□□□ 1.04
CHRM3P20309 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHRM3P20309 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CHRM3P20309 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CHRM3P20309 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHRM3P20309 UNC93B3-201ENST00000308076 687 ntBASIC21.56■■□□□ 1.04
CHRM3P20309 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.56■■□□□ 1.04
CHRM3P20309 CA15P2-201ENST00000611168 834 ntBASIC21.56■■□□□ 1.04
CHRM3P20309 AC136469.2-201ENST00000623944 1028 ntBASIC21.56■■□□□ 1.04
CHRM3P20309 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.56■■□□□ 1.04
CHRM3P20309 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHRM3P20309 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CHRM3P20309 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CHRM3P20309 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.56■■□□□ 1.04
CHRM3P20309 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.55■■□□□ 1.04
CHRM3P20309 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CHRM3P20309 AC092053.2-201ENST00000640557 1818 ntBASIC21.55■■□□□ 1.04
CHRM3P20309 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRM3P20309 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CHRM3P20309 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CHRM3P20309 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.55■■□□□ 1.04
CHRM3P20309 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.55■■□□□ 1.04
CHRM3P20309 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CHRM3P20309 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms