Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 CD63-213ENST00000552164 845 ntTSL 221.45■■□□□ 1.025e-9■■□□□ 13.2
XRCC6P12956 CD63-211ENST00000551173 788 ntTSL 321■□□□□ 0.955e-9■■□□□ 13.2
XRCC6P12956 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC18.17■□□□□ 0.55e-9■■□□□ 13.2
XRCC6P12956 CD63-209ENST00000550050 829 ntTSL 517.05■□□□□ 0.325e-9■■□□□ 13.2
XRCC6P12956 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.25e-9■■□□□ 13.2
XRCC6P12956 CD63-203ENST00000546457 607 ntTSL 215.53■□□□□ 0.085e-9■■□□□ 13.2
XRCC6P12956 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.22■■□□□ 1.633e-6■■□□□ 13.2
XRCC6P12956 TMC6-222ENST00000592076 693 ntTSL 318.1■□□□□ 0.493e-6■■□□□ 13.2
XRCC6P12956 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC29.92■■■□□ 2.386e-8■■□□□ 13.2
XRCC6P12956 OXSR1-206ENST00000492714 471 ntTSL 323.45■■□□□ 1.346e-8■■□□□ 13.2
XRCC6P12956 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.966e-8■■□□□ 13.2
XRCC6P12956 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.214e-8■■□□□ 13.1
XRCC6P12956 RABL6-210ENST00000484471 2746 ntTSL 525.47■■□□□ 1.674e-8■■□□□ 13.1
XRCC6P12956 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.264e-8■■□□□ 13.1
XRCC6P12956 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.094e-8■■□□□ 13.1
XRCC6P12956 RABL6-208ENST00000464941 3361 ntTSL 220.62■□□□□ 0.894e-8■■□□□ 13.1
XRCC6P12956 RABL6-209ENST00000466096 3949 ntTSL 1 (best)18.36■□□□□ 0.534e-8■■□□□ 13.1
XRCC6P12956 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.234e-8■■□□□ 13.1
XRCC6P12956 RABL6-207ENST00000461992 763 ntTSL 1 (best)14.25□□□□□ -0.134e-8■■□□□ 13.1
XRCC6P12956 STX4-208ENST00000478150 545 ntTSL 419.98■□□□□ 0.791e-6■■□□□ 13.1
XRCC6P12956 STX4-217ENST00000613541 649 ntTSL 218.93■□□□□ 0.621e-6■■□□□ 13.1
XRCC6P12956 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.645e-8■■□□□ 13.1
XRCC6P12956 C22orf34-202ENST00000400023 1469 ntTSL 1 (best)17.66■□□□□ 0.425e-7■■□□□ 13.1
XRCC6P12956 RNA5SP370-201ENST00000362545 121 ntBASIC12.7□□□□□ -0.381e-11■■□□□ 13
XRCC6P12956 MKRN1-214ENST00000495305 1390 ntTSL 231.33■■■□□ 2.616e-7■■□□□ 13
XRCC6P12956 MKRN1-212ENST00000481705 636 ntTSL 528.88■■■□□ 2.216e-7■■□□□ 13
XRCC6P12956 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.186e-7■■□□□ 13
XRCC6P12956 MKRN1-216ENST00000498535 607 ntTSL 228.13■■■□□ 2.096e-7■■□□□ 13
XRCC6P12956 MKRN1-215ENST00000496169 1625 ntTSL 225.96■■□□□ 1.756e-7■■□□□ 13
XRCC6P12956 DCXR-213ENST00000580320 915 ntTSL 224.46■■□□□ 1.513e-6■■□□□ 13
XRCC6P12956 DCXR-221ENST00000585164 475 ntTSL 524.31■■□□□ 1.483e-6■■□□□ 13
XRCC6P12956 DCXR-206ENST00000578273 877 ntTSL 524.18■■□□□ 1.463e-6■■□□□ 13
XRCC6P12956 DCXR-210ENST00000579334 1251 ntTSL 523.75■■□□□ 1.393e-6■■□□□ 13
XRCC6P12956 DCXR-207ENST00000578885 968 ntTSL 523.41■■□□□ 1.343e-6■■□□□ 13
XRCC6P12956 DCXR-214ENST00000580750 1076 ntTSL 523.35■■□□□ 1.333e-6■■□□□ 13
XRCC6P12956 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.33e-6■■□□□ 13
XRCC6P12956 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.97■■□□□ 1.276e-7■■□□□ 13
XRCC6P12956 DCXR-218ENST00000582900 676 ntTSL 322.62■■□□□ 1.213e-6■■□□□ 13
XRCC6P12956 DCXR-215ENST00000581584 766 ntTSL 321.8■■□□□ 1.083e-6■■□□□ 13
XRCC6P12956 MKRN1-206ENST00000471104 1053 ntTSL 520.88■□□□□ 0.936e-7■■□□□ 13
XRCC6P12956 MKRN1-207ENST00000473444 720 ntTSL 320.61■□□□□ 0.896e-7■■□□□ 13
XRCC6P12956 DCXR-209ENST00000579155 430 ntTSL 520.22■□□□□ 0.833e-6■■□□□ 13
XRCC6P12956 TNKS1BP1-204ENST00000528882 4336 ntTSL 519.56■□□□□ 0.726e-7■■□□□ 13
XRCC6P12956 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.526e-7■■□□□ 13
XRCC6P12956 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.426e-7■■□□□ 13
XRCC6P12956 MKRN1-209ENST00000475010 3467 ntTSL 217.55■□□□□ 0.46e-7■■□□□ 13
XRCC6P12956 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.346e-7■■□□□ 13
XRCC6P12956 DCXR-204ENST00000577712 429 ntTSL 516.89■□□□□ 0.293e-6■■□□□ 13
XRCC6P12956 MKRN1-204ENST00000467513 1133 ntTSL 516.48■□□□□ 0.236e-7■■□□□ 13
XRCC6P12956 MKRN1-210ENST00000475180 560 ntTSL 512.73□□□□□ -0.376e-7■■□□□ 13
XRCC6P12956 MKRN1-211ENST00000480552 906 ntTSL 5 BASIC10.79□□□□□ -0.686e-7■■□□□ 13
XRCC6P12956 MKRN1-213ENST00000494939 784 ntTSL 39.25□□□□□ -0.936e-7■■□□□ 13
XRCC6P12956 KCTD2-205ENST00000579242 524 ntTSL 414.14□□□□□ -0.151e-14■■□□□ 13
XRCC6P12956 KCTD2-209ENST00000584767 815 ntTSL 1 (best)13.74□□□□□ -0.211e-14■■□□□ 13
XRCC6P12956 KCTD2-207ENST00000582840 565 ntTSL 411.23□□□□□ -0.611e-14■■□□□ 13
XRCC6P12956 KCTD2-208ENST00000584570 666 ntTSL 39.58□□□□□ -0.881e-14■■□□□ 13
XRCC6P12956 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC8.73□□□□□ -1.011e-14■■□□□ 13
XRCC6P12956 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.184e-9■■□□□ 13
XRCC6P12956 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.53■■□□□ 1.049e-8■■□□□ 13
XRCC6P12956 WNK2-208ENST00000453718 1937 ntTSL 520.47■□□□□ 0.879e-8■■□□□ 13
XRCC6P12956 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.829e-8■■□□□ 13
XRCC6P12956 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.79e-8■■□□□ 13
XRCC6P12956 WNK2-214ENST00000474009 561 ntTSL 319.31■□□□□ 0.689e-8■■□□□ 13
XRCC6P12956 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.589e-8■■□□□ 13
XRCC6P12956 JMJD1C-211ENST00000633035 499 ntTSL 318.49■□□□□ 0.559e-8■■□□□ 13
XRCC6P12956 WNK2-205ENST00000432730 7792 ntAPPRIS ALT2 TSL 1 (best)18.31■□□□□ 0.529e-8■■□□□ 13
XRCC6P12956 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.08■□□□□ 0.484e-9■■□□□ 13
XRCC6P12956 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.379e-8■■□□□ 13
XRCC6P12956 WNK2-203ENST00000411624 6679 ntTSL 1 (best)17.3■□□□□ 0.369e-8■■□□□ 13
XRCC6P12956 WNK2-207ENST00000448251 3224 ntTSL 216.63■□□□□ 0.259e-8■■□□□ 13
XRCC6P12956 DYNC1LI2-209ENST00000565532 744 ntTSL 512.81□□□□□ -0.364e-9■■□□□ 13
XRCC6P12956 MSI2-214ENST00000581776 493 ntTSL 26.01□□□□□ -1.459e-8■■□□□ 13
XRCC6P12956 MSI2-212ENST00000579590 452 ntTSL 55.9□□□□□ -1.469e-8■■□□□ 13
XRCC6P12956 MSI2-215ENST00000582453 496 ntTSL 33.8□□□□□ -1.89e-8■■□□□ 13
XRCC6P12956 SNORD15B-201ENST00000384714 146 ntBASIC3.51□□□□□ -1.858e-88■■□□□ 13
XRCC6P12956 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.73e-6■■□□□ 13
XRCC6P12956 MTA2-203ENST00000526844 627 ntTSL 310.03□□□□□ -0.83e-6■■□□□ 13
XRCC6P12956 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.389e-7■■□□□ 13
XRCC6P12956 PTCHD4-202ENST00000398738 3232 ntTSL 1 (best)12.61□□□□□ -0.399e-7■■□□□ 13
XRCC6P12956 ZC3H11A-212ENST00000495527 8404 ntTSL 1 (best)5.78□□□□□ -1.482e-9■■□□□ 13
XRCC6P12956 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.67□□□□□ -1.52e-9■■□□□ 13
XRCC6P12956 RPL23A-207ENST00000578181 593 ntTSL 23.63□□□□□ -1.837e-19■■□□□ 12.9
XRCC6P12956 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.447e-19■■□□□ 12.9
XRCC6P12956 PDCD6IP-203ENST00000413073 566 ntTSL 420.56■□□□□ 0.883e-16■■□□□ 12.9
XRCC6P12956 PDCD6IP-217ENST00000498147 802 ntTSL 320.23■□□□□ 0.833e-16■■□□□ 12.9
XRCC6P12956 PDCD6IP-204ENST00000430877 582 ntTSL 318.11■□□□□ 0.493e-16■■□□□ 12.9
XRCC6P12956 PDCD6IP-205ENST00000435909 587 ntTSL 517.8■□□□□ 0.443e-16■■□□□ 12.9
XRCC6P12956 PDCD6IP-210ENST00000477798 587 ntTSL 416.25■□□□□ 0.193e-16■■□□□ 12.9
XRCC6P12956 PDCD6IP-206ENST00000457054 5962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.353e-16■■□□□ 12.9
XRCC6P12956 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.753e-16■■□□□ 12.9
XRCC6P12956 TFG-205ENST00000479672 776 ntTSL 326.05■■□□□ 1.763e-11■■□□□ 12.9
XRCC6P12956 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.713e-11■■□□□ 12.9
XRCC6P12956 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.54■■□□□ 1.363e-11■■□□□ 12.9
XRCC6P12956 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.313e-11■■□□□ 12.9
XRCC6P12956 TFG-207ENST00000487505 913 ntTSL 320.73■□□□□ 0.913e-11■■□□□ 12.9
XRCC6P12956 TFG-203ENST00000463568 723 ntTSL 319.31■□□□□ 0.683e-11■■□□□ 12.9
XRCC6P12956 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.579e-42■■□□□ 12.9
XRCC6P12956 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.479e-42■■□□□ 12.9
XRCC6P12956 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.093e-11■■□□□ 12.9
XRCC6P12956 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.13e-11■■□□□ 12.9
Retrieved 100 of 6,788 protein–RNA pairs in 42.1 ms