Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MMP2P08253 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MMP2P08253 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
MMP2P08253 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.01■■□□□ 1.11
MMP2P08253 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP2P08253 AC079089.2-201ENST00000531211 1277 ntBASIC22.01■■□□□ 1.11
MMP2P08253 AC005837.3-201ENST00000612163 286 ntBASIC22.01■■□□□ 1.11
MMP2P08253 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MMP2P08253 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.01■■□□□ 1.11
MMP2P08253 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MMP2P08253 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP2P08253 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP2P08253 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP2P08253 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
MMP2P08253 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.01■■□□□ 1.11
MMP2P08253 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
MMP2P08253 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.01■■□□□ 1.11
MMP2P08253 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.01■■□□□ 1.11
MMP2P08253 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
MMP2P08253 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22■■□□□ 1.11
MMP2P08253 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP2P08253 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP2P08253 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22■■□□□ 1.11
MMP2P08253 AC126544.1-201ENST00000580842 1059 ntBASIC22■■□□□ 1.11
MMP2P08253 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP2P08253 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22■■□□□ 1.11
MMP2P08253 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22■■□□□ 1.11
MMP2P08253 OXCT2P1-201ENST00000447263 1535 ntBASIC22■■□□□ 1.11
MMP2P08253 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP2P08253 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MMP2P08253 RASA4CP-201ENST00000424092 1398 ntBASIC21.99■■□□□ 1.11
MMP2P08253 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
MMP2P08253 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.99■■□□□ 1.11
MMP2P08253 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 AC091305.1-201ENST00000479476 895 ntBASIC21.99■■□□□ 1.11
MMP2P08253 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.99■■□□□ 1.11
MMP2P08253 AC087239.1-201ENST00000622671 572 ntBASIC21.99■■□□□ 1.11
MMP2P08253 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MMP2P08253 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.98■■□□□ 1.11
MMP2P08253 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP2P08253 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP2P08253 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MMP2P08253 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.98■■□□□ 1.11
MMP2P08253 IGHV3-19-201ENST00000521488 291 ntBASIC21.98■■□□□ 1.11
MMP2P08253 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.98■■□□□ 1.11
MMP2P08253 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
MMP2P08253 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
MMP2P08253 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MMP2P08253 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP2P08253 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MMP2P08253 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
MMP2P08253 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MMP2P08253 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
MMP2P08253 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
MMP2P08253 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.97■■□□□ 1.11
MMP2P08253 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.97■■□□□ 1.11
MMP2P08253 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
MMP2P08253 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.97■■□□□ 1.11
MMP2P08253 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
MMP2P08253 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
MMP2P08253 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP2P08253 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MMP2P08253 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP2P08253 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
MMP2P08253 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP2P08253 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP2P08253 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.96■■□□□ 1.11
MMP2P08253 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
MMP2P08253 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP2P08253 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP2P08253 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP2P08253 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
MMP2P08253 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP2P08253 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.96■■□□□ 1.11
MMP2P08253 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.96■■□□□ 1.11
MMP2P08253 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.11
MMP2P08253 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MMP2P08253 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.95■■□□□ 1.1
MMP2P08253 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.95■■□□□ 1.1
MMP2P08253 AC142381.2-201ENST00000566120 298 ntBASIC21.95■■□□□ 1.1
MMP2P08253 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.95■■□□□ 1.1
MMP2P08253 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.95■■□□□ 1.1
MMP2P08253 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MMP2P08253 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms