Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LSM8O95777 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LSM8O95777 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LSM8O95777 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LSM8O95777 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.03■■□□□ 1.28
LSM8O95777 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LSM8O95777 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
LSM8O95777 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LSM8O95777 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.02■■□□□ 1.28
LSM8O95777 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.02■■□□□ 1.28
LSM8O95777 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.02■■□□□ 1.28
LSM8O95777 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.02■■□□□ 1.28
LSM8O95777 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
LSM8O95777 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LSM8O95777 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
LSM8O95777 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LSM8O95777 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.02■■□□□ 1.28
LSM8O95777 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.02■■□□□ 1.28
LSM8O95777 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.01■■□□□ 1.27
LSM8O95777 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LSM8O95777 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.01■■□□□ 1.27
LSM8O95777 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
LSM8O95777 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LSM8O95777 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
LSM8O95777 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.01■■□□□ 1.27
LSM8O95777 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LSM8O95777 BX842568.3-201ENST00000418104 571 ntBASIC23.01■■□□□ 1.27
LSM8O95777 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.01■■□□□ 1.27
LSM8O95777 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.01■■□□□ 1.27
LSM8O95777 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.01■■□□□ 1.27
LSM8O95777 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LSM8O95777 C11orf96-202ENST00000528572 1834 ntBASIC23.01■■□□□ 1.27
LSM8O95777 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LSM8O95777 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23■■□□□ 1.27
LSM8O95777 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LSM8O95777 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23■■□□□ 1.27
LSM8O95777 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23■■□□□ 1.27
LSM8O95777 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LSM8O95777 AC096631.2-201ENST00000436136 790 ntBASIC23■■□□□ 1.27
LSM8O95777 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23■■□□□ 1.27
LSM8O95777 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23■■□□□ 1.27
LSM8O95777 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
LSM8O95777 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23■■□□□ 1.27
LSM8O95777 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
LSM8O95777 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LSM8O95777 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LSM8O95777 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.99■■□□□ 1.27
LSM8O95777 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.99■■□□□ 1.27
LSM8O95777 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.99■■□□□ 1.27
LSM8O95777 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.99■■□□□ 1.27
LSM8O95777 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.99■■□□□ 1.27
LSM8O95777 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LSM8O95777 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LSM8O95777 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
LSM8O95777 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
LSM8O95777 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LSM8O95777 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LSM8O95777 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
LSM8O95777 OXCT2P1-201ENST00000447263 1535 ntBASIC22.98■■□□□ 1.27
LSM8O95777 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.98■■□□□ 1.27
LSM8O95777 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
LSM8O95777 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LSM8O95777 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LSM8O95777 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LSM8O95777 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LSM8O95777 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LSM8O95777 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.97■■□□□ 1.27
LSM8O95777 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LSM8O95777 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
LSM8O95777 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.97■■□□□ 1.27
LSM8O95777 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
LSM8O95777 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.97■■□□□ 1.27
LSM8O95777 AC233992.3-201ENST00000607491 485 ntBASIC22.97■■□□□ 1.27
LSM8O95777 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
LSM8O95777 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LSM8O95777 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LSM8O95777 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LSM8O95777 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LSM8O95777 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
LSM8O95777 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
LSM8O95777 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
LSM8O95777 AC106739.1-201ENST00000617035 715 ntBASIC22.96■■□□□ 1.27
LSM8O95777 OR7E47P-201ENST00000546390 1422 ntBASIC22.96■■□□□ 1.27
LSM8O95777 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
LSM8O95777 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
LSM8O95777 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
LSM8O95777 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.27
LSM8O95777 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSM8O95777 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSM8O95777 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSM8O95777 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
LSM8O95777 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LSM8O95777 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
LSM8O95777 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSM8O95777 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.95■■□□□ 1.26
LSM8O95777 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
LSM8O95777 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LSM8O95777 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.95■■□□□ 1.26
LSM8O95777 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSM8O95777 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms