Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLPXO76031 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLPXO76031 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLPXO76031 AC129492.7-201ENST00000622992 756 ntBASIC19.66■□□□□ 0.74
CLPXO76031 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLPXO76031 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLPXO76031 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLPXO76031 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.66■□□□□ 0.74
CLPXO76031 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.66■□□□□ 0.74
CLPXO76031 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CLPXO76031 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.65■□□□□ 0.74
CLPXO76031 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLPXO76031 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLPXO76031 AC087742.1-201ENST00000575880 1738 ntBASIC19.65■□□□□ 0.74
CLPXO76031 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLPXO76031 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLPXO76031 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.65■□□□□ 0.74
CLPXO76031 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLPXO76031 RARRES2P1-201ENST00000474487 481 ntBASIC19.65■□□□□ 0.74
CLPXO76031 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.65■□□□□ 0.74
CLPXO76031 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLPXO76031 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLPXO76031 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLPXO76031 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLPXO76031 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLPXO76031 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLPXO76031 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLPXO76031 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLPXO76031 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLPXO76031 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.64■□□□□ 0.74
CLPXO76031 AC018755.3-202ENST00000596210 929 ntBASIC19.64■□□□□ 0.73
CLPXO76031 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.64■□□□□ 0.73
CLPXO76031 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.64■□□□□ 0.73
CLPXO76031 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPXO76031 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPXO76031 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPXO76031 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLPXO76031 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 LINC01006-201ENST00000333319 2292 ntBASIC19.63■□□□□ 0.73
CLPXO76031 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CLPXO76031 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.63■□□□□ 0.73
CLPXO76031 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.63■□□□□ 0.73
CLPXO76031 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLPXO76031 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLPXO76031 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.62■□□□□ 0.73
CLPXO76031 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.62■□□□□ 0.73
CLPXO76031 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPXO76031 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLPXO76031 DUX4L9-201ENST00000449051 1259 ntBASIC19.62■□□□□ 0.73
CLPXO76031 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.62■□□□□ 0.73
CLPXO76031 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.62■□□□□ 0.73
CLPXO76031 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.62■□□□□ 0.73
CLPXO76031 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPXO76031 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CLPXO76031 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CLPXO76031 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.62■□□□□ 0.73
CLPXO76031 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLPXO76031 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.61■□□□□ 0.73
CLPXO76031 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.61■□□□□ 0.73
CLPXO76031 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 SPCS2P3-201ENST00000500401 656 ntBASIC19.61■□□□□ 0.73
CLPXO76031 MIR6765-201ENST00000614092 87 ntBASIC19.61■□□□□ 0.73
CLPXO76031 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLPXO76031 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLPXO76031 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CLPXO76031 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CLPXO76031 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.6■□□□□ 0.73
CLPXO76031 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLPXO76031 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CLPXO76031 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.59■□□□□ 0.73
CLPXO76031 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLPXO76031 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CLPXO76031 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms