Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
UPK3AO75631 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
UPK3AO75631 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK3AO75631 AC007375.3-201ENST00000600936 2314 ntBASIC19.51■□□□□ 0.71
UPK3AO75631 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UPK3AO75631 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK3AO75631 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
UPK3AO75631 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.51■□□□□ 0.71
UPK3AO75631 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.51■□□□□ 0.71
UPK3AO75631 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK3AO75631 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
UPK3AO75631 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.51■□□□□ 0.71
UPK3AO75631 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UPK3AO75631 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UPK3AO75631 C11orf96-202ENST00000528572 1834 ntBASIC19.51■□□□□ 0.71
UPK3AO75631 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UPK3AO75631 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPK3AO75631 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK3AO75631 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.5■□□□□ 0.71
UPK3AO75631 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK3AO75631 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPK3AO75631 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPK3AO75631 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPK3AO75631 MIR4767-201ENST00000582827 78 ntBASIC19.5■□□□□ 0.71
UPK3AO75631 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.5■□□□□ 0.71
UPK3AO75631 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UPK3AO75631 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UPK3AO75631 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
UPK3AO75631 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UPK3AO75631 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UPK3AO75631 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
UPK3AO75631 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK3AO75631 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UPK3AO75631 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.49■□□□□ 0.71
UPK3AO75631 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UPK3AO75631 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.49■□□□□ 0.71
UPK3AO75631 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.49■□□□□ 0.71
UPK3AO75631 AL139246.5-201ENST00000606645 996 ntBASIC19.49■□□□□ 0.71
UPK3AO75631 AC106739.1-201ENST00000617035 715 ntBASIC19.49■□□□□ 0.71
UPK3AO75631 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.49■□□□□ 0.71
UPK3AO75631 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK3AO75631 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK3AO75631 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
UPK3AO75631 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UPK3AO75631 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UPK3AO75631 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK3AO75631 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.48■□□□□ 0.71
UPK3AO75631 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
UPK3AO75631 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.48■□□□□ 0.71
UPK3AO75631 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.48■□□□□ 0.71
UPK3AO75631 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK3AO75631 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK3AO75631 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
UPK3AO75631 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
UPK3AO75631 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK3AO75631 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK3AO75631 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
UPK3AO75631 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
UPK3AO75631 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.47■□□□□ 0.71
UPK3AO75631 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
UPK3AO75631 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.46■□□□□ 0.71
UPK3AO75631 AC010525.1-201ENST00000585559 441 ntBASIC19.46■□□□□ 0.71
UPK3AO75631 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.46■□□□□ 0.71
UPK3AO75631 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.46■□□□□ 0.71
UPK3AO75631 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UPK3AO75631 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.46■□□□□ 0.71
UPK3AO75631 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
UPK3AO75631 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UPK3AO75631 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK3AO75631 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.45■□□□□ 0.7
UPK3AO75631 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.45■□□□□ 0.7
UPK3AO75631 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.45■□□□□ 0.7
UPK3AO75631 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.45■□□□□ 0.7
UPK3AO75631 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.45■□□□□ 0.7
UPK3AO75631 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
UPK3AO75631 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.45■□□□□ 0.7
UPK3AO75631 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UPK3AO75631 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
UPK3AO75631 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
UPK3AO75631 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK3AO75631 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.44■□□□□ 0.7
UPK3AO75631 OR2I1P-207ENST00000453522 948 ntBASIC19.44■□□□□ 0.7
UPK3AO75631 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.44■□□□□ 0.7
UPK3AO75631 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK3AO75631 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK3AO75631 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK3AO75631 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.44■□□□□ 0.7
UPK3AO75631 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UPK3AO75631 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK3AO75631 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UPK3AO75631 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UPK3AO75631 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms