Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF4O60810 UNC93B3-201ENST00000308076 687 ntBASIC21.02■□□□□ 0.96
PRAMEF4O60810 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF4O60810 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.02■□□□□ 0.96
PRAMEF4O60810 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF4O60810 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.02■□□□□ 0.96
PRAMEF4O60810 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF4O60810 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF4O60810 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.02■□□□□ 0.96
PRAMEF4O60810 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PRAMEF4O60810 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF4O60810 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRAMEF4O60810 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PRAMEF4O60810 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.02■□□□□ 0.95
PRAMEF4O60810 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF4O60810 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 SLC47A1P1-202ENST00000449666 945 ntBASIC21.01■□□□□ 0.95
PRAMEF4O60810 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF4O60810 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF4O60810 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRAMEF4O60810 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.01■□□□□ 0.95
PRAMEF4O60810 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21■□□□□ 0.95
PRAMEF4O60810 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF4O60810 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF4O60810 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21■□□□□ 0.95
PRAMEF4O60810 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21■□□□□ 0.95
PRAMEF4O60810 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21■□□□□ 0.95
PRAMEF4O60810 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF4O60810 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRAMEF4O60810 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF4O60810 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRAMEF4O60810 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRAMEF4O60810 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PRAMEF4O60810 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PRAMEF4O60810 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
PRAMEF4O60810 C11orf96-202ENST00000528572 1834 ntBASIC20.99■□□□□ 0.95
PRAMEF4O60810 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PRAMEF4O60810 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRAMEF4O60810 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF4O60810 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF4O60810 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF4O60810 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF4O60810 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PRAMEF4O60810 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF4O60810 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF4O60810 AC024257.2-201ENST00000549699 147 ntBASIC20.98■□□□□ 0.95
PRAMEF4O60810 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRAMEF4O60810 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF4O60810 AC008406.3-201ENST00000620001 1374 ntBASIC20.97■□□□□ 0.95
PRAMEF4O60810 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF4O60810 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEF4O60810 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF4O60810 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF4O60810 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF4O60810 MIR4767-201ENST00000582827 78 ntBASIC20.97■□□□□ 0.95
PRAMEF4O60810 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF4O60810 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PRAMEF4O60810 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.97■□□□□ 0.95
PRAMEF4O60810 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRAMEF4O60810 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.97■□□□□ 0.95
PRAMEF4O60810 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRAMEF4O60810 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF4O60810 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF4O60810 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF4O60810 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF4O60810 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF4O60810 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF4O60810 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRAMEF4O60810 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF4O60810 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.96■□□□□ 0.95
PRAMEF4O60810 AL136162.1-201ENST00000607711 1078 ntBASIC20.96■□□□□ 0.95
PRAMEF4O60810 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRAMEF4O60810 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms