Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX2O60749 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SNX2O60749 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.74■■□□□ 1.07
SNX2O60749 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX2O60749 AC126544.1-201ENST00000580842 1059 ntBASIC21.74■■□□□ 1.07
SNX2O60749 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX2O60749 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SNX2O60749 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.74■■□□□ 1.07
SNX2O60749 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX2O60749 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SNX2O60749 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.73■■□□□ 1.07
SNX2O60749 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX2O60749 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX2O60749 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.73■■□□□ 1.07
SNX2O60749 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX2O60749 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX2O60749 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.73■■□□□ 1.07
SNX2O60749 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SNX2O60749 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SNX2O60749 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SNX2O60749 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.72■■□□□ 1.07
SNX2O60749 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.72■■□□□ 1.07
SNX2O60749 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.72■■□□□ 1.07
SNX2O60749 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNX2O60749 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.71■■□□□ 1.07
SNX2O60749 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.71■■□□□ 1.07
SNX2O60749 AC010525.1-201ENST00000585559 441 ntBASIC21.71■■□□□ 1.07
SNX2O60749 EP400NL-214ENST00000641289 2402 ntBASIC21.71■■□□□ 1.07
SNX2O60749 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX2O60749 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX2O60749 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNX2O60749 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
SNX2O60749 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SNX2O60749 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SNX2O60749 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.7■■□□□ 1.06
SNX2O60749 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SNX2O60749 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.7■■□□□ 1.06
SNX2O60749 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.7■■□□□ 1.06
SNX2O60749 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
SNX2O60749 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNX2O60749 AC004687.1-201ENST00000579003 1625 ntBASIC21.69■■□□□ 1.06
SNX2O60749 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SNX2O60749 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SNX2O60749 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX2O60749 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SNX2O60749 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.69■■□□□ 1.06
SNX2O60749 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.69■■□□□ 1.06
SNX2O60749 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SNX2O60749 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX2O60749 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNX2O60749 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.69■■□□□ 1.06
SNX2O60749 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNX2O60749 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SNX2O60749 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.68■■□□□ 1.06
SNX2O60749 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SNX2O60749 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SNX2O60749 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.68■■□□□ 1.06
SNX2O60749 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.68■■□□□ 1.06
SNX2O60749 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SNX2O60749 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SNX2O60749 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SNX2O60749 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
SNX2O60749 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNX2O60749 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SNX2O60749 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX2O60749 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.67■■□□□ 1.06
SNX2O60749 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNX2O60749 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX2O60749 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNX2O60749 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms