Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NPHS1O60500 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPHS1O60500 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NPHS1O60500 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPHS1O60500 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPHS1O60500 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.22■□□□□ 0.99
NPHS1O60500 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPHS1O60500 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPHS1O60500 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPHS1O60500 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPHS1O60500 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
NPHS1O60500 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
NPHS1O60500 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPHS1O60500 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPHS1O60500 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NPHS1O60500 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPHS1O60500 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPHS1O60500 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPHS1O60500 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPHS1O60500 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPHS1O60500 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.21■□□□□ 0.99
NPHS1O60500 MIR4787-201ENST00000607364 84 ntBASIC21.21■□□□□ 0.99
NPHS1O60500 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NPHS1O60500 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPHS1O60500 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPHS1O60500 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
NPHS1O60500 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.2■□□□□ 0.99
NPHS1O60500 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.2■□□□□ 0.98
NPHS1O60500 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.2■□□□□ 0.98
NPHS1O60500 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.2■□□□□ 0.98
NPHS1O60500 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.2■□□□□ 0.98
NPHS1O60500 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPHS1O60500 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NPHS1O60500 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
NPHS1O60500 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.19■□□□□ 0.98
NPHS1O60500 AC010997.5-201ENST00000609182 354 ntBASIC21.19■□□□□ 0.98
NPHS1O60500 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPHS1O60500 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.18■□□□□ 0.98
NPHS1O60500 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPHS1O60500 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.18■□□□□ 0.98
NPHS1O60500 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPHS1O60500 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NPHS1O60500 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NPHS1O60500 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NPHS1O60500 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NPHS1O60500 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.18■□□□□ 0.98
NPHS1O60500 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
NPHS1O60500 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPHS1O60500 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.18■□□□□ 0.98
NPHS1O60500 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.18■□□□□ 0.98
NPHS1O60500 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPHS1O60500 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPHS1O60500 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.18■□□□□ 0.98
NPHS1O60500 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NPHS1O60500 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NPHS1O60500 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.17■□□□□ 0.98
NPHS1O60500 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
NPHS1O60500 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NPHS1O60500 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
NPHS1O60500 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPHS1O60500 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.17■□□□□ 0.98
NPHS1O60500 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPHS1O60500 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.16■□□□□ 0.98
NPHS1O60500 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPHS1O60500 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPHS1O60500 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPHS1O60500 AL031602.1-201ENST00000633169 911 ntBASIC21.16■□□□□ 0.98
NPHS1O60500 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPHS1O60500 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.16■□□□□ 0.98
NPHS1O60500 AC005229.4-201ENST00000610085 2198 ntBASIC21.16■□□□□ 0.98
NPHS1O60500 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPHS1O60500 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPHS1O60500 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPHS1O60500 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms