Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GDF9O60383 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.41■■□□□ 1.02
GDF9O60383 MYCNOS-205ENST00000641950 531 ntBASIC21.41■■□□□ 1.02
GDF9O60383 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GDF9O60383 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GDF9O60383 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.41■■□□□ 1.02
GDF9O60383 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
GDF9O60383 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF9O60383 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GDF9O60383 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.4■■□□□ 1.02
GDF9O60383 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF9O60383 AC138932.3-201ENST00000567634 1902 ntBASIC21.4■■□□□ 1.02
GDF9O60383 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GDF9O60383 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF9O60383 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GDF9O60383 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.4■■□□□ 1.02
GDF9O60383 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.4■■□□□ 1.02
GDF9O60383 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
GDF9O60383 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.4■■□□□ 1.02
GDF9O60383 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF9O60383 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GDF9O60383 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.4■■□□□ 1.02
GDF9O60383 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GDF9O60383 KRT87P-202ENST00000534226 1464 ntBASIC21.39■■□□□ 1.02
GDF9O60383 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.39■■□□□ 1.02
GDF9O60383 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
GDF9O60383 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GDF9O60383 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GDF9O60383 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
GDF9O60383 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.39■■□□□ 1.01
GDF9O60383 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.39■■□□□ 1.01
GDF9O60383 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.39■■□□□ 1.01
GDF9O60383 MIR4758-201ENST00000577688 71 ntBASIC21.39■■□□□ 1.01
GDF9O60383 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.39■■□□□ 1.01
GDF9O60383 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GDF9O60383 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
GDF9O60383 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GDF9O60383 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GDF9O60383 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF9O60383 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF9O60383 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF9O60383 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF9O60383 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF9O60383 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF9O60383 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.38■■□□□ 1.01
GDF9O60383 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GDF9O60383 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.38■■□□□ 1.01
GDF9O60383 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GDF9O60383 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.37■■□□□ 1.01
GDF9O60383 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GDF9O60383 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GDF9O60383 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.37■■□□□ 1.01
GDF9O60383 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GDF9O60383 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.37■■□□□ 1.01
GDF9O60383 GCSHP5-201ENST00000443090 522 ntBASIC21.37■■□□□ 1.01
GDF9O60383 AC010141.3-201ENST00000456659 717 ntBASIC21.37■■□□□ 1.01
GDF9O60383 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
GDF9O60383 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
GDF9O60383 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.37■■□□□ 1.01
GDF9O60383 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.37■■□□□ 1.01
GDF9O60383 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GDF9O60383 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GDF9O60383 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GDF9O60383 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GDF9O60383 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GDF9O60383 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
GDF9O60383 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.36■■□□□ 1.01
GDF9O60383 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.36■■□□□ 1.01
GDF9O60383 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
GDF9O60383 AC068587.7-201ENST00000641602 218 ntBASIC21.36■■□□□ 1.01
GDF9O60383 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GDF9O60383 AC004687.1-201ENST00000579003 1625 ntBASIC21.36■■□□□ 1.01
GDF9O60383 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GDF9O60383 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDF9O60383 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDF9O60383 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
GDF9O60383 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDF9O60383 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.35■■□□□ 1.01
GDF9O60383 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GDF9O60383 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GDF9O60383 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GDF9O60383 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDF9O60383 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GDF9O60383 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
GDF9O60383 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDF9O60383 AP003733.4-201ENST00000623785 1697 ntBASIC21.34■■□□□ 1.01
GDF9O60383 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDF9O60383 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDF9O60383 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.34■■□□□ 1.01
GDF9O60383 AL158047.1-201ENST00000445918 881 ntBASIC21.34■■□□□ 1.01
GDF9O60383 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.34■■□□□ 1.01
GDF9O60383 RPS2P4-201ENST00000476944 856 ntBASIC21.34■■□□□ 1.01
GDF9O60383 RARRES2P4-201ENST00000514074 484 ntBASIC21.34■■□□□ 1.01
GDF9O60383 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GDF9O60383 AP001160.3-201ENST00000601484 763 ntBASIC21.34■■□□□ 1.01
GDF9O60383 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDF9O60383 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.34■■□□□ 1.01
GDF9O60383 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GDF9O60383 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDF9O60383 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms