Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SLC28A2O43868 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC28A2O43868 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC28A2O43868 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC28A2O43868 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC28A2O43868 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC28A2O43868 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC28A2O43868 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC28A2O43868 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC28A2O43868 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SLC28A2O43868 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC28A2O43868 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC28A2O43868 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC28A2O43868 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC28A2O43868 AL353803.4-201ENST00000565882 1934 ntBASIC20.85■□□□□ 0.93
SLC28A2O43868 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC28A2O43868 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC28A2O43868 AC027612.3-201ENST00000413684 1047 ntBASIC20.85■□□□□ 0.93
SLC28A2O43868 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC28A2O43868 AC066615.1-201ENST00000640911 628 ntBASIC20.85■□□□□ 0.93
SLC28A2O43868 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC28A2O43868 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC28A2O43868 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC28A2O43868 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC28A2O43868 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC28A2O43868 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC28A2O43868 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SLC28A2O43868 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC28A2O43868 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC28A2O43868 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC28A2O43868 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SLC28A2O43868 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC28A2O43868 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC28A2O43868 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC28A2O43868 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC28A2O43868 AL358852.1-201ENST00000623174 1268 ntBASIC20.84■□□□□ 0.93
SLC28A2O43868 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC28A2O43868 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC28A2O43868 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC28A2O43868 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
SLC28A2O43868 TSPY26P-201ENST00000476365 1326 ntBASIC20.83■□□□□ 0.93
SLC28A2O43868 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SLC28A2O43868 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SLC28A2O43868 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC28A2O43868 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SLC28A2O43868 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC28A2O43868 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC28A2O43868 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
SLC28A2O43868 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SLC28A2O43868 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC28A2O43868 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC28A2O43868 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC28A2O43868 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SLC28A2O43868 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC28A2O43868 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SLC28A2O43868 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SLC28A2O43868 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SLC28A2O43868 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.83■□□□□ 0.92
SLC28A2O43868 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.83■□□□□ 0.92
SLC28A2O43868 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SLC28A2O43868 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC28A2O43868 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SLC28A2O43868 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC28A2O43868 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC28A2O43868 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.82■□□□□ 0.92
SLC28A2O43868 CCDC92B-201ENST00000575506 885 ntBASIC20.82■□□□□ 0.92
SLC28A2O43868 AC080038.1-201ENST00000611274 1154 ntBASIC20.82■□□□□ 0.92
SLC28A2O43868 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC28A2O43868 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.82■□□□□ 0.92
SLC28A2O43868 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SLC28A2O43868 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC28A2O43868 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC28A2O43868 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.81■□□□□ 0.92
SLC28A2O43868 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
SLC28A2O43868 MIR6084-201ENST00000622012 110 ntBASIC20.81■□□□□ 0.92
SLC28A2O43868 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SLC28A2O43868 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SLC28A2O43868 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.81■□□□□ 0.92
SLC28A2O43868 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms