Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 AC079834.2-201ENST00000609776 1949 ntBASIC19.4■□□□□ 0.7
TRAF3IP2O43734 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
TRAF3IP2O43734 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.39■□□□□ 0.7
TRAF3IP2O43734 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.39■□□□□ 0.69
TRAF3IP2O43734 AP005435.1-201ENST00000529293 1178 ntBASIC19.39■□□□□ 0.69
TRAF3IP2O43734 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.39■□□□□ 0.69
TRAF3IP2O43734 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP2O43734 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP2O43734 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAF3IP2O43734 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP2O43734 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAF3IP2O43734 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAF3IP2O43734 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 AC010141.3-201ENST00000456659 717 ntBASIC19.38■□□□□ 0.69
TRAF3IP2O43734 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAF3IP2O43734 AC087239.1-201ENST00000622671 572 ntBASIC19.38■□□□□ 0.69
TRAF3IP2O43734 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 AC233992.3-201ENST00000607491 485 ntBASIC19.37■□□□□ 0.69
TRAF3IP2O43734 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRAF3IP2O43734 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 EDA-201ENST00000338901 1233 ntBASIC19.36■□□□□ 0.69
TRAF3IP2O43734 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 AC079089.2-201ENST00000531211 1277 ntBASIC19.36■□□□□ 0.69
TRAF3IP2O43734 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 AC092053.2-201ENST00000640557 1818 ntBASIC19.36■□□□□ 0.69
TRAF3IP2O43734 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP2O43734 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 AP001330.3-201ENST00000520123 633 ntBASIC19.35■□□□□ 0.69
TRAF3IP2O43734 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 AL139246.5-201ENST00000606645 996 ntBASIC19.35■□□□□ 0.69
TRAF3IP2O43734 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.35■□□□□ 0.69
TRAF3IP2O43734 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP2O43734 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms