Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV3S1A0A5B6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 AC129492.7-201ENST00000622992 756 ntBASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV3S1A0A5B6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV3S1A0A5B6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
TCRBV3S1A0A5B6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
TCRBV3S1A0A5B6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
TCRBV3S1A0A5B6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV3S1A0A5B6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV3S1A0A5B6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.39■□□□□ 0.85
TCRBV3S1A0A5B6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 MIR4449-201ENST00000578365 66 ntBASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV3S1A0A5B6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 KRT18P24-201ENST00000344739 1156 ntBASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.37■□□□□ 0.85
TCRBV3S1A0A5B6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 DUX4L4-201ENST00000566884 1269 ntBASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV3S1A0A5B6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV3S1A0A5B6 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.35■□□□□ 0.85
TCRBV3S1A0A5B6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV3S1A0A5B6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV3S1A0A5B6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TCRBV3S1A0A5B6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV3S1A0A5B6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV3S1A0A5B6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV3S1A0A5B6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV3S1A0A5B6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms