Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRBV6-5A0A0K0K1A5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ATP5G2P3-201ENST00000429083 425 ntBASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ABHD17AP5-201ENST00000580133 923 ntBASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 AC010980.1-201ENST00000587192 1142 ntBASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRBV6-5A0A0K0K1A5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 AC004987.1-201ENST00000428627 508 ntBASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 FEM1AP4-201ENST00000443167 1987 ntBASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRBV6-5A0A0K0K1A5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
TRBV6-5A0A0K0K1A5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms