Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV24A0A0B4J272 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV24A0A0B4J272 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV24A0A0B4J272 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 AC092171.4-201ENST00000609130 632 ntBASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 AC007375.3-201ENST00000600936 2314 ntBASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV24A0A0B4J272 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 MIR4466-201ENST00000606121 54 ntBASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV24A0A0B4J272 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 AC010542.4-201ENST00000563151 1910 ntBASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV24A0A0B4J272 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV24A0A0B4J272 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV24A0A0B4J272 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms