Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 AL157384.1-201ENST00000445995 2473 ntBASIC16.1■□□□□ 0.17
TRAV9-2A0A087WT02 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-2A0A087WT02 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-2A0A087WT02 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAV9-2A0A087WT02 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV9-2A0A087WT02 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV9-2A0A087WT02 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV9-2A0A087WT02 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 AL031848.2-201ENST00000607670 837 ntBASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV9-2A0A087WT02 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-2A0A087WT02 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAV9-2A0A087WT02 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-2A0A087WT02 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV9-2A0A087WT02 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
TRAV9-2A0A087WT02 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 PVT1_1.1-201ENST00000615125 194 ntBASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV9-2A0A087WT02 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 THA1P-201ENST00000590384 1145 ntBASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV9-2A0A087WT02 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 KRT18P24-201ENST00000344739 1156 ntBASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 FAM99A-202ENST00000538190 1989 ntBASIC16.05■□□□□ 0.16
TRAV9-2A0A087WT02 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms