Protein–RNA interactions for Protein: Q86WT1

TTC30A, Tetratricopeptide repeat protein 30A, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC30AQ86WT1 AC091691.1-201ENST00000583587 1018 ntBASIC13.41□□□□□ -0.26
TTC30AQ86WT1 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 FP671120.4-201ENST00000629969 923 ntBASIC13.41□□□□□ -0.26
TTC30AQ86WT1 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 PSG9-201ENST00000244293 2073 ntTSL 2 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 FAM213A-201ENST00000372181 2058 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 AC005682.1-201ENST00000452069 1467 ntBASIC13.41□□□□□ -0.26
TTC30AQ86WT1 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 IKZF3-211ENST00000394189 1552 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TTC30AQ86WT1 USP3-213ENST00000559711 1693 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 RGPD4-AS1-202ENST00000457647 1792 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 ZNRD1ASP-215ENST00000425604 1986 ntTSL 3 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 TNFAIP3-209ENST00000619035 2267 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 HMGN1P4-201ENST00000419500 290 ntBASIC13.4□□□□□ -0.26
TTC30AQ86WT1 CRIP1P2-201ENST00000425396 228 ntBASIC13.4□□□□□ -0.26
TTC30AQ86WT1 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 FAM86JP-202ENST00000484500 988 ntBASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AL450346.2-201ENST00000495602 1024 ntBASIC13.4□□□□□ -0.26
TTC30AQ86WT1 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AP003040.1-201ENST00000532044 1024 ntBASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AL138828.1-208ENST00000585946 824 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AC254633.1-201ENST00000606790 345 ntBASIC13.4□□□□□ -0.26
TTC30AQ86WT1 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 PCDHA4-202ENST00000512229 4163 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 AC017083.4-201ENST00000406334 2306 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TTC30AQ86WT1 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TTC30AQ86WT1 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
TTC30AQ86WT1 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TTC30AQ86WT1 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms