Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRAF6Q9Y4K3 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAF6Q9Y4K3 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAF6Q9Y4K3 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAF6Q9Y4K3 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAF6Q9Y4K3 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAF6Q9Y4K3 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAF6Q9Y4K3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAF6Q9Y4K3 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TRAF6Q9Y4K3 SYTL2-206ENST00000389960 4299 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 DGCR11-201ENST00000609958 2214 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 GEMIN8-202ENST00000380523 1682 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 NEFL-201ENST00000610854 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 MRPL24-201ENST00000361531 883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 PHBP10-201ENST00000416467 784 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AC083873.1-201ENST00000421179 1099 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AC069218.1-201ENST00000435269 762 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 KRT18P26-201ENST00000454475 1281 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AC018463.1-201ENST00000456674 917 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 ALG1L7P-201ENST00000502317 768 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AC073352.2-201ENST00000609385 439 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 PRKN-210ENST00000612540 603 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 MIR6858-201ENST00000620733 67 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AC005274.1-201ENST00000623460 802 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 SIGLEC6-206ENST00000436458 1713 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 AL031590.1-202ENST00000641466 1737 ntBASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 WAC-204ENST00000375646 2176 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 PLXDC1-206ENST00000444911 2082 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAF6Q9Y4K3 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 GLYR1-201ENST00000321919 3772 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 RRBP1-203ENST00000377807 3792 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 BCAS1-201ENST00000371435 3020 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 ZP1-201ENST00000278853 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 PKMP1-201ENST00000455804 1523 ntBASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 PAMR1-205ENST00000611014 2613 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 MRPL45-204ENST00000619548 1554 ntTSL 3 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 MIR33B-201ENST00000385104 96 ntBASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAF6Q9Y4K3 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms