Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 AC144652.1-201ENST00000609974 1624 ntBASIC17.8■□□□□ 0.44
RCL1Q9Y2P8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 DUX4L9-201ENST00000449051 1259 ntBASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 AC244015.2-201ENST00000616358 1861 ntBASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RCL1Q9Y2P8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.78■□□□□ 0.44
RCL1Q9Y2P8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCL1Q9Y2P8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCL1Q9Y2P8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCL1Q9Y2P8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RCL1Q9Y2P8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RCL1Q9Y2P8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCL1Q9Y2P8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RCL1Q9Y2P8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RCL1Q9Y2P8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RCL1Q9Y2P8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RCL1Q9Y2P8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 MIR7108-201ENST00000614319 87 ntBASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 AL121603.2-201ENST00000557373 2117 ntBASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RCL1Q9Y2P8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 AC004448.1-201ENST00000458332 883 ntBASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms