Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.69■□□□□ 0.9
LRCH1Q9Y2L9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRCH1Q9Y2L9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRCH1Q9Y2L9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRCH1Q9Y2L9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 AL157400.5-201ENST00000507624 621 ntBASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRCH1Q9Y2L9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
LRCH1Q9Y2L9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRCH1Q9Y2L9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRCH1Q9Y2L9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LRCH1Q9Y2L9 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.64■□□□□ 0.89
LRCH1Q9Y2L9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 FEM1AP4-201ENST00000443167 1987 ntBASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRCH1Q9Y2L9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRCH1Q9Y2L9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms