Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 PBX2P1-201ENST00000493219 1291 ntBASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGC3Q9UN70 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 AC010141.3-201ENST00000456659 717 ntBASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 AC079089.2-201ENST00000531211 1277 ntBASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 AC087239.1-201ENST00000622671 572 ntBASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 EP400NL-214ENST00000641289 2402 ntBASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHGC3Q9UN70 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 AC233992.3-201ENST00000607491 485 ntBASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHGC3Q9UN70 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC3Q9UN70 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHGC3Q9UN70 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC3Q9UN70 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC3Q9UN70 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDHGC3Q9UN70 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGC3Q9UN70 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGC3Q9UN70 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGC3Q9UN70 AC092053.2-201ENST00000640557 1818 ntBASIC23.08■■□□□ 1.28
PCDHGC3Q9UN70 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
PCDHGC3Q9UN70 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 EDA-201ENST00000338901 1233 ntBASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGC3Q9UN70 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGC3Q9UN70 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PCDHGC3Q9UN70 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PCDHGC3Q9UN70 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC3Q9UN70 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHGC3Q9UN70 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PCDHGC3Q9UN70 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms