Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN2Q9UHD9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN2Q9UHD9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN2Q9UHD9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN2Q9UHD9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.33■□□□□ 0.53
UBQLN2Q9UHD9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBQLN2Q9UHD9 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN2Q9UHD9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
UBQLN2Q9UHD9 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.33■□□□□ 0.52
UBQLN2Q9UHD9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
UBQLN2Q9UHD9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.33■□□□□ 0.52
UBQLN2Q9UHD9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBQLN2Q9UHD9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 ABHD17AP5-201ENST00000580133 923 ntBASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBQLN2Q9UHD9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 AC079630.1-202ENST00000618127 1840 ntBASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 AC010542.4-201ENST00000563151 1910 ntBASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
UBQLN2Q9UHD9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBQLN2Q9UHD9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 AC007029.1-201ENST00000604183 313 ntBASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBQLN2Q9UHD9 AL020996.1-203ENST00000536896 2307 ntBASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 AC025884.2-201ENST00000553429 711 ntBASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
UBQLN2Q9UHD9 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN2Q9UHD9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
UBQLN2Q9UHD9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms