Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 AC006455.2-201ENST00000429931 906 ntBASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 AC127496.7-201ENST00000625110 1798 ntBASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
NCKIPSDQ9NZQ3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.98■■□□□ 1.11
NCKIPSDQ9NZQ3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.97■■□□□ 1.11
NCKIPSDQ9NZQ3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 AC242852.2-201ENST00000615738 1807 ntBASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NCKIPSDQ9NZQ3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.95■■□□□ 1.11
NCKIPSDQ9NZQ3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
NCKIPSDQ9NZQ3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
NCKIPSDQ9NZQ3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 AL353803.4-201ENST00000565882 1934 ntBASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NCKIPSDQ9NZQ3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 AC087623.3-201ENST00000607047 1098 ntBASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 pRNA.6-201ENST00000610482 90 ntBASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 pRNA.5-201ENST00000612139 90 ntBASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 pRNA.11-201ENST00000618423 90 ntBASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 pRNA.13-201ENST00000619112 90 ntBASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NCKIPSDQ9NZQ3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 AC126544.1-201ENST00000580842 1059 ntBASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
NCKIPSDQ9NZQ3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.92■■□□□ 1.1
NCKIPSDQ9NZQ3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NCKIPSDQ9NZQ3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCKIPSDQ9NZQ3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKIPSDQ9NZQ3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCKIPSDQ9NZQ3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms