Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 AL138724.1-201ENST00000606771 1088 ntBASIC20.23■□□□□ 0.83
POLE3Q9NRF9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
POLE3Q9NRF9 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
POLE3Q9NRF9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 AL031602.1-201ENST00000633169 911 ntBASIC20.22■□□□□ 0.83
POLE3Q9NRF9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
POLE3Q9NRF9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 AC080038.3-201ENST00000623346 1952 ntBASIC20.21■□□□□ 0.83
POLE3Q9NRF9 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 OR2I1P-207ENST00000453522 948 ntBASIC20.21■□□□□ 0.83
POLE3Q9NRF9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.21■□□□□ 0.83
POLE3Q9NRF9 AC068587.7-201ENST00000641602 218 ntBASIC20.21■□□□□ 0.83
POLE3Q9NRF9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
POLE3Q9NRF9 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
POLE3Q9NRF9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 AC137767.1-201ENST00000602918 1920 ntBASIC20.2■□□□□ 0.82
POLE3Q9NRF9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 MIR4466-201ENST00000606121 54 ntBASIC20.2■□□□□ 0.82
POLE3Q9NRF9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.2■□□□□ 0.82
POLE3Q9NRF9 EP400NL-214ENST00000641289 2402 ntBASIC20.19■□□□□ 0.82
POLE3Q9NRF9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.19■□□□□ 0.82
POLE3Q9NRF9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
POLE3Q9NRF9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms