Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.58■□□□□ 0.89
NEUROD4Q9HD90 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.58■□□□□ 0.89
NEUROD4Q9HD90 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
NEUROD4Q9HD90 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEUROD4Q9HD90 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.58■□□□□ 0.89
NEUROD4Q9HD90 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NEUROD4Q9HD90 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEUROD4Q9HD90 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.58■□□□□ 0.88
NEUROD4Q9HD90 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEUROD4Q9HD90 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.58■□□□□ 0.88
NEUROD4Q9HD90 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 AC092171.4-201ENST00000609130 632 ntBASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEUROD4Q9HD90 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 AC133637.1-201ENST00000624115 1537 ntBASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEUROD4Q9HD90 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 SRD5A1P1-201ENST00000442297 786 ntBASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEUROD4Q9HD90 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 pRNA.6-201ENST00000610482 90 ntBASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 pRNA.5-201ENST00000612139 90 ntBASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 pRNA.11-201ENST00000618423 90 ntBASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 pRNA.13-201ENST00000619112 90 ntBASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEUROD4Q9HD90 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 MIR638-201ENST00000385237 100 ntBASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 AC006455.2-201ENST00000429931 906 ntBASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 AC099791.2-201ENST00000605725 427 ntBASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.53■□□□□ 0.88
NEUROD4Q9HD90 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NEUROD4Q9HD90 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NEUROD4Q9HD90 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms