Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSL2Q9HCI7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.58
MSL2Q9HCI7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.7■□□□□ 0.58
MSL2Q9HCI7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.69■□□□□ 0.58
MSL2Q9HCI7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.68■□□□□ 0.58
MSL2Q9HCI7 AC019069.1-201ENST00000610008 1333 ntBASIC18.68■□□□□ 0.58
MSL2Q9HCI7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 AC068473.5-201ENST00000616428 2072 ntBASIC18.67■□□□□ 0.58
MSL2Q9HCI7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 AC105265.2-201ENST00000467189 838 ntBASIC18.67■□□□□ 0.58
MSL2Q9HCI7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 AL031602.1-201ENST00000633169 911 ntBASIC18.67■□□□□ 0.58
MSL2Q9HCI7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MSL2Q9HCI7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 AP005435.1-201ENST00000529293 1178 ntBASIC18.66■□□□□ 0.58
MSL2Q9HCI7 TSPY26P-201ENST00000476365 1326 ntBASIC18.66■□□□□ 0.58
MSL2Q9HCI7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MSL2Q9HCI7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MSL2Q9HCI7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms