Protein–RNA interactions for Protein: Q9H930

SP140L, Nuclear body protein SP140-like protein, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP140LQ9H930 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SP140LQ9H930 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SP140LQ9H930 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SP140LQ9H930 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.72■□□□□ 0.75
SP140LQ9H930 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SP140LQ9H930 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.72■□□□□ 0.75
SP140LQ9H930 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.72■□□□□ 0.75
SP140LQ9H930 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SP140LQ9H930 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SP140LQ9H930 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SP140LQ9H930 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.71■□□□□ 0.75
SP140LQ9H930 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.71■□□□□ 0.75
SP140LQ9H930 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.71■□□□□ 0.75
SP140LQ9H930 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.71■□□□□ 0.75
SP140LQ9H930 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SP140LQ9H930 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SP140LQ9H930 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.7■□□□□ 0.74
SP140LQ9H930 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SP140LQ9H930 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.7■□□□□ 0.74
SP140LQ9H930 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SP140LQ9H930 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SP140LQ9H930 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.7■□□□□ 0.74
SP140LQ9H930 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SP140LQ9H930 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SP140LQ9H930 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SP140LQ9H930 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SP140LQ9H930 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SP140LQ9H930 AC139530.1-201ENST00000575312 1977 ntBASIC19.7■□□□□ 0.74
SP140LQ9H930 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.69■□□□□ 0.74
SP140LQ9H930 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.69■□□□□ 0.74
SP140LQ9H930 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SP140LQ9H930 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SP140LQ9H930 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SP140LQ9H930 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SP140LQ9H930 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.68■□□□□ 0.74
SP140LQ9H930 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.68■□□□□ 0.74
SP140LQ9H930 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 BX664725.1-201ENST00000438252 379 ntBASIC19.68■□□□□ 0.74
SP140LQ9H930 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.68■□□□□ 0.74
SP140LQ9H930 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.68■□□□□ 0.74
SP140LQ9H930 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.68■□□□□ 0.74
SP140LQ9H930 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.68■□□□□ 0.74
SP140LQ9H930 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.68■□□□□ 0.74
SP140LQ9H930 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SP140LQ9H930 AC007952.6-201ENST00000573168 2673 ntBASIC19.68■□□□□ 0.74
SP140LQ9H930 AC003957.1-201ENST00000625108 2673 ntBASIC19.68■□□□□ 0.74
SP140LQ9H930 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SP140LQ9H930 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.67■□□□□ 0.74
SP140LQ9H930 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SP140LQ9H930 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SP140LQ9H930 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.67■□□□□ 0.74
SP140LQ9H930 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SP140LQ9H930 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SP140LQ9H930 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SP140LQ9H930 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SP140LQ9H930 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms