Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 CA15P2-201ENST00000611168 834 ntBASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZSWIM4Q9H7M6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
ZSWIM4Q9H7M6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.67■■□□□ 1.54
ZSWIM4Q9H7M6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.67■■□□□ 1.54
ZSWIM4Q9H7M6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.67■■□□□ 1.54
ZSWIM4Q9H7M6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZSWIM4Q9H7M6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
ZSWIM4Q9H7M6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZSWIM4Q9H7M6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM4Q9H7M6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM4Q9H7M6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM4Q9H7M6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM4Q9H7M6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM4Q9H7M6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.66■■□□□ 1.54
ZSWIM4Q9H7M6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM4Q9H7M6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZSWIM4Q9H7M6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZSWIM4Q9H7M6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.65■■□□□ 1.54
ZSWIM4Q9H7M6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.65■■□□□ 1.54
ZSWIM4Q9H7M6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
ZSWIM4Q9H7M6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 AC126544.1-201ENST00000580842 1059 ntBASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
ZSWIM4Q9H7M6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 LINC00565-201ENST00000562710 2331 ntBASIC24.63■■□□□ 1.53
ZSWIM4Q9H7M6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 AC233723.2-201ENST00000623798 2106 ntBASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ZSWIM4Q9H7M6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
ZSWIM4Q9H7M6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 AC105265.2-201ENST00000467189 838 ntBASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 AP005435.1-201ENST00000529293 1178 ntBASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
ZSWIM4Q9H7M6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.59■■□□□ 1.53
ZSWIM4Q9H7M6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms