Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC087239.1-201ENST00000622671 572 ntBASIC27.54■■■□□ 2
CHMP4BQ9H444 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.54■■■□□ 2
CHMP4BQ9H444 EP400NL-214ENST00000641289 2402 ntBASIC27.54■■■□□ 2
CHMP4BQ9H444 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC27.53■■■□□ 2
CHMP4BQ9H444 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHMP4BQ9H444 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
CHMP4BQ9H444 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
CHMP4BQ9H444 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHMP4BQ9H444 AL136116.3-201ENST00000402907 1138 ntBASIC27.53■■■□□ 2
CHMP4BQ9H444 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.53■■■□□ 2
CHMP4BQ9H444 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHMP4BQ9H444 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
CHMP4BQ9H444 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC27.53■■■□□ 2
CHMP4BQ9H444 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
CHMP4BQ9H444 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
CHMP4BQ9H444 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.52■■■□□ 2
CHMP4BQ9H444 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.52■■■□□ 2
CHMP4BQ9H444 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC27.52■■■□□ 2
CHMP4BQ9H444 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC27.52■■■□□ 2
CHMP4BQ9H444 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
CHMP4BQ9H444 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC27.51■■■□□ 2
CHMP4BQ9H444 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
CHMP4BQ9H444 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
CHMP4BQ9H444 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC27.51■■□□□ 1.99
CHMP4BQ9H444 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
CHMP4BQ9H444 AC131212.1-201ENST00000613771 668 ntBASIC27.51■■□□□ 1.99
CHMP4BQ9H444 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC27.51■■□□□ 1.99
CHMP4BQ9H444 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC27.51■■□□□ 1.99
CHMP4BQ9H444 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.51■■□□□ 1.99
CHMP4BQ9H444 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CHMP4BQ9H444 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC27.5■■□□□ 1.99
CHMP4BQ9H444 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
CHMP4BQ9H444 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC27.5■■□□□ 1.99
CHMP4BQ9H444 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CHMP4BQ9H444 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 AC079089.2-201ENST00000531211 1277 ntBASIC27.49■■□□□ 1.99
CHMP4BQ9H444 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC27.49■■□□□ 1.99
CHMP4BQ9H444 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
CHMP4BQ9H444 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
CHMP4BQ9H444 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 C11orf96-202ENST00000528572 1834 ntBASIC27.46■■□□□ 1.99
CHMP4BQ9H444 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
CHMP4BQ9H444 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
CHMP4BQ9H444 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
CHMP4BQ9H444 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC27.45■■□□□ 1.99
CHMP4BQ9H444 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHMP4BQ9H444 AC010141.3-201ENST00000456659 717 ntBASIC27.45■■□□□ 1.98
CHMP4BQ9H444 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC27.45■■□□□ 1.98
CHMP4BQ9H444 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC27.45■■□□□ 1.98
CHMP4BQ9H444 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHMP4BQ9H444 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
CHMP4BQ9H444 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
CHMP4BQ9H444 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms