Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX18Q96RF0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX18Q96RF0 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX18Q96RF0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX18Q96RF0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.78■□□□□ 0.76
SNX18Q96RF0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX18Q96RF0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SNX18Q96RF0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX18Q96RF0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX18Q96RF0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX18Q96RF0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX18Q96RF0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX18Q96RF0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX18Q96RF0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SNX18Q96RF0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX18Q96RF0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX18Q96RF0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SNX18Q96RF0 MTDHP2-201ENST00000601468 714 ntBASIC19.77■□□□□ 0.76
SNX18Q96RF0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX18Q96RF0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.77■□□□□ 0.75
SNX18Q96RF0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNX18Q96RF0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SNX18Q96RF0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 AC008406.3-201ENST00000620001 1374 ntBASIC19.76■□□□□ 0.75
SNX18Q96RF0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SNX18Q96RF0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX18Q96RF0 AC009086.3-201ENST00000623486 1008 ntBASIC19.76■□□□□ 0.75
SNX18Q96RF0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX18Q96RF0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SNX18Q96RF0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX18Q96RF0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SNX18Q96RF0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.75■□□□□ 0.75
SNX18Q96RF0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX18Q96RF0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SNX18Q96RF0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.75■□□□□ 0.75
SNX18Q96RF0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.75■□□□□ 0.75
SNX18Q96RF0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX18Q96RF0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
SNX18Q96RF0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX18Q96RF0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX18Q96RF0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX18Q96RF0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNX18Q96RF0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNX18Q96RF0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
SNX18Q96RF0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.74■□□□□ 0.75
SNX18Q96RF0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNX18Q96RF0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.74■□□□□ 0.75
SNX18Q96RF0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX18Q96RF0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX18Q96RF0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX18Q96RF0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX18Q96RF0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX18Q96RF0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SNX18Q96RF0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.73■□□□□ 0.75
SNX18Q96RF0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNX18Q96RF0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
SNX18Q96RF0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX18Q96RF0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX18Q96RF0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNX18Q96RF0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SNX18Q96RF0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SNX18Q96RF0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SNX18Q96RF0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.72■□□□□ 0.75
SNX18Q96RF0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.72■□□□□ 0.75
SNX18Q96RF0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SNX18Q96RF0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SNX18Q96RF0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX18Q96RF0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX18Q96RF0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SNX18Q96RF0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX18Q96RF0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX18Q96RF0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX18Q96RF0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms