Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NEIL1Q96FI4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NEIL1Q96FI4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 AL117328.2-201ENST00000624617 1940 ntBASIC18.35■□□□□ 0.53
NEIL1Q96FI4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NEIL1Q96FI4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 MIR935-201ENST00000401179 91 ntBASIC18.34■□□□□ 0.53
NEIL1Q96FI4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NEIL1Q96FI4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.33■□□□□ 0.53
NEIL1Q96FI4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NEIL1Q96FI4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEIL1Q96FI4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
NEIL1Q96FI4 TSPY26P-201ENST00000476365 1326 ntBASIC18.33■□□□□ 0.53
NEIL1Q96FI4 IRS3P-201ENST00000223076 1006 ntBASIC18.33■□□□□ 0.52
NEIL1Q96FI4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NEIL1Q96FI4 IGHV3-19-201ENST00000521488 291 ntBASIC18.33■□□□□ 0.52
NEIL1Q96FI4 AP005435.1-201ENST00000529293 1178 ntBASIC18.33■□□□□ 0.52
NEIL1Q96FI4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.33■□□□□ 0.52
NEIL1Q96FI4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEIL1Q96FI4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
NEIL1Q96FI4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NEIL1Q96FI4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEIL1Q96FI4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
NEIL1Q96FI4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.33■□□□□ 0.52
NEIL1Q96FI4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NEIL1Q96FI4 C9orf163-202ENST00000624034 2573 ntBASIC18.32■□□□□ 0.52
NEIL1Q96FI4 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.31■□□□□ 0.52
NEIL1Q96FI4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 AC068587.7-201ENST00000641602 218 ntBASIC18.31■□□□□ 0.52
NEIL1Q96FI4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
NEIL1Q96FI4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
NEIL1Q96FI4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms