Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB39BQ96DA2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.6■□□□□ 0.57
RAB39BQ96DA2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB39BQ96DA2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 IRS3P-201ENST00000223076 1006 ntBASIC18.59■□□□□ 0.57
RAB39BQ96DA2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RAB39BQ96DA2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB39BQ96DA2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
RAB39BQ96DA2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB39BQ96DA2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB39BQ96DA2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB39BQ96DA2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB39BQ96DA2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.58■□□□□ 0.56
RAB39BQ96DA2 MIR5787-201ENST00000611784 55 ntBASIC18.58■□□□□ 0.56
RAB39BQ96DA2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAB39BQ96DA2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB39BQ96DA2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAB39BQ96DA2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB39BQ96DA2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB39BQ96DA2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 DUX4L4-201ENST00000566884 1269 ntBASIC18.57■□□□□ 0.56
RAB39BQ96DA2 AC133637.1-201ENST00000624115 1537 ntBASIC18.57■□□□□ 0.56
RAB39BQ96DA2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
RAB39BQ96DA2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 AC144652.1-201ENST00000609974 1624 ntBASIC18.56■□□□□ 0.56
RAB39BQ96DA2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 AL499627.2-201ENST00000606283 725 ntBASIC18.56■□□□□ 0.56
RAB39BQ96DA2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB39BQ96DA2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 LINC01529-204ENST00000636474 1715 ntBASIC18.55■□□□□ 0.56
RAB39BQ96DA2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RAB39BQ96DA2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB39BQ96DA2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB39BQ96DA2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAB39BQ96DA2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms