Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APH1AQ96BI3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APH1AQ96BI3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APH1AQ96BI3 MIR572-201ENST00000384983 95 ntBASIC19.3■□□□□ 0.68
APH1AQ96BI3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.3■□□□□ 0.68
APH1AQ96BI3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.3■□□□□ 0.68
APH1AQ96BI3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.3■□□□□ 0.68
APH1AQ96BI3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.3■□□□□ 0.68
APH1AQ96BI3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APH1AQ96BI3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APH1AQ96BI3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APH1AQ96BI3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APH1AQ96BI3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APH1AQ96BI3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APH1AQ96BI3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
APH1AQ96BI3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.29■□□□□ 0.68
APH1AQ96BI3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.29■□□□□ 0.68
APH1AQ96BI3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
APH1AQ96BI3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
APH1AQ96BI3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 C9orf163-202ENST00000624034 2573 ntBASIC19.29■□□□□ 0.68
APH1AQ96BI3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.29■□□□□ 0.68
APH1AQ96BI3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.29■□□□□ 0.68
APH1AQ96BI3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.29■□□□□ 0.68
APH1AQ96BI3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
APH1AQ96BI3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APH1AQ96BI3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
APH1AQ96BI3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.28■□□□□ 0.68
APH1AQ96BI3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.28■□□□□ 0.68
APH1AQ96BI3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.28■□□□□ 0.68
APH1AQ96BI3 OXCT2P1-201ENST00000447263 1535 ntBASIC19.28■□□□□ 0.68
APH1AQ96BI3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
APH1AQ96BI3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APH1AQ96BI3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.28■□□□□ 0.68
APH1AQ96BI3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
APH1AQ96BI3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.27■□□□□ 0.68
APH1AQ96BI3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.27■□□□□ 0.68
APH1AQ96BI3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
APH1AQ96BI3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.27■□□□□ 0.68
APH1AQ96BI3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.27■□□□□ 0.68
APH1AQ96BI3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
APH1AQ96BI3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APH1AQ96BI3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.27■□□□□ 0.67
APH1AQ96BI3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
APH1AQ96BI3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
APH1AQ96BI3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.26■□□□□ 0.67
APH1AQ96BI3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.26■□□□□ 0.67
APH1AQ96BI3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APH1AQ96BI3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
APH1AQ96BI3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APH1AQ96BI3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APH1AQ96BI3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.26■□□□□ 0.67
APH1AQ96BI3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APH1AQ96BI3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.26■□□□□ 0.67
APH1AQ96BI3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.26■□□□□ 0.67
APH1AQ96BI3 AL358852.1-201ENST00000623174 1268 ntBASIC19.26■□□□□ 0.67
APH1AQ96BI3 AC105233.4-201ENST00000642045 216 ntBASIC19.26■□□□□ 0.67
APH1AQ96BI3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
APH1AQ96BI3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
APH1AQ96BI3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
APH1AQ96BI3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.25■□□□□ 0.67
APH1AQ96BI3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
APH1AQ96BI3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
APH1AQ96BI3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.25■□□□□ 0.67
APH1AQ96BI3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms