Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
AP3S1Q92572 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.2■□□□□ 0.66
AP3S1Q92572 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3S1Q92572 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
AP3S1Q92572 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
AP3S1Q92572 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.2■□□□□ 0.66
AP3S1Q92572 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3S1Q92572 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3S1Q92572 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3S1Q92572 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.2■□□□□ 0.66
AP3S1Q92572 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.2■□□□□ 0.66
AP3S1Q92572 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3S1Q92572 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3S1Q92572 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.2■□□□□ 0.66
AP3S1Q92572 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
AP3S1Q92572 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
AP3S1Q92572 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
AP3S1Q92572 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
AP3S1Q92572 MIR3648-2-201ENST00000581792 180 ntBASIC19.19■□□□□ 0.66
AP3S1Q92572 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.19■□□□□ 0.66
AP3S1Q92572 MIR3648-1-201ENST00000615959 180 ntBASIC19.19■□□□□ 0.66
AP3S1Q92572 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.19■□□□□ 0.66
AP3S1Q92572 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
AP3S1Q92572 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3S1Q92572 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
AP3S1Q92572 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.18■□□□□ 0.66
AP3S1Q92572 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3S1Q92572 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3S1Q92572 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3S1Q92572 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3S1Q92572 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.18■□□□□ 0.66
AP3S1Q92572 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
AP3S1Q92572 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
AP3S1Q92572 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
AP3S1Q92572 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
AP3S1Q92572 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.17■□□□□ 0.66
AP3S1Q92572 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3S1Q92572 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3S1Q92572 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3S1Q92572 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
AP3S1Q92572 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
AP3S1Q92572 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3S1Q92572 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.17■□□□□ 0.66
AP3S1Q92572 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3S1Q92572 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3S1Q92572 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.17■□□□□ 0.66
AP3S1Q92572 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
AP3S1Q92572 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
AP3S1Q92572 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.16■□□□□ 0.66
AP3S1Q92572 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.16■□□□□ 0.66
AP3S1Q92572 AC011551.1-201ENST00000614101 683 ntBASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
AP3S1Q92572 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.16■□□□□ 0.66
AP3S1Q92572 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
AP3S1Q92572 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
AP3S1Q92572 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 AL157384.1-201ENST00000445995 2473 ntBASIC19.15■□□□□ 0.66
AP3S1Q92572 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.15■□□□□ 0.66
AP3S1Q92572 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.15■□□□□ 0.66
AP3S1Q92572 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
AP3S1Q92572 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.15■□□□□ 0.66
AP3S1Q92572 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms