Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
ALMS1Q8TCU4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC14.96□□□□□ -0.02
ALMS1Q8TCU4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.96□□□□□ -0.02
ALMS1Q8TCU4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC14.96□□□□□ -0.02
ALMS1Q8TCU4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 AC128676.1-201ENST00000454392 318 ntBASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 RNA5SP413-201ENST00000516373 109 ntBASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 AC008550.1-201ENST00000511500 884 ntBASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC14.95□□□□□ -0.02
ALMS1Q8TCU4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
ALMS1Q8TCU4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 FP325331.1-202ENST00000623531 1380 ntBASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 MKRN4P-201ENST00000444706 1521 ntBASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
ALMS1Q8TCU4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 AP001160.3-201ENST00000601484 763 ntBASIC14.92□□□□□ -0.02
ALMS1Q8TCU4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 AC005224.4-201ENST00000583262 1652 ntBASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 AC133552.2-202ENST00000575694 574 ntBASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
ALMS1Q8TCU4 UNC93B4-201ENST00000505679 747 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms