Protein–RNA interactions for Protein: Q8TCA0

LRRC20, Leucine-rich repeat-containing protein 20, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20Q8TCA0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 CR559946.2-201ENST00000623684 991 ntBASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC20Q8TCA0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC20Q8TCA0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC20Q8TCA0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC20Q8TCA0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC20Q8TCA0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC20Q8TCA0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC20Q8TCA0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC20Q8TCA0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.27■□□□□ 0.51
LRRC20Q8TCA0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC20Q8TCA0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC20Q8TCA0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 MIR3648-2-201ENST00000581792 180 ntBASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 MIR3648-1-201ENST00000615959 180 ntBASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC20Q8TCA0 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 LETM1P2-201ENST00000597330 2178 ntBASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LRRC20Q8TCA0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC20Q8TCA0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms