Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
COL23A1Q86Y22 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
COL23A1Q86Y22 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL23A1Q86Y22 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL23A1Q86Y22 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
COL23A1Q86Y22 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.83■■■□□ 2.05
COL23A1Q86Y22 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC27.83■■■□□ 2.05
COL23A1Q86Y22 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC27.83■■■□□ 2.05
COL23A1Q86Y22 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL23A1Q86Y22 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
COL23A1Q86Y22 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL23A1Q86Y22 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL23A1Q86Y22 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
COL23A1Q86Y22 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC27.82■■■□□ 2.04
COL23A1Q86Y22 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
COL23A1Q86Y22 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
COL23A1Q86Y22 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.82■■■□□ 2.04
COL23A1Q86Y22 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 AC005224.4-201ENST00000583262 1652 ntBASIC27.81■■■□□ 2.04
COL23A1Q86Y22 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC27.81■■■□□ 2.04
COL23A1Q86Y22 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 RNA5SP413-201ENST00000516373 109 ntBASIC27.8■■■□□ 2.04
COL23A1Q86Y22 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
COL23A1Q86Y22 OXCT2P1-201ENST00000447263 1535 ntBASIC27.8■■■□□ 2.04
COL23A1Q86Y22 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL23A1Q86Y22 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
COL23A1Q86Y22 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
COL23A1Q86Y22 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL23A1Q86Y22 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.79■■■□□ 2.04
COL23A1Q86Y22 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
COL23A1Q86Y22 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.79■■■□□ 2.04
COL23A1Q86Y22 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.78■■■□□ 2.04
COL23A1Q86Y22 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
COL23A1Q86Y22 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
COL23A1Q86Y22 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.78■■■□□ 2.04
COL23A1Q86Y22 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL23A1Q86Y22 AC145676.1-201ENST00000514988 2004 ntBASIC27.77■■■□□ 2.04
COL23A1Q86Y22 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC27.77■■■□□ 2.04
COL23A1Q86Y22 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
COL23A1Q86Y22 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC27.77■■■□□ 2.04
COL23A1Q86Y22 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
COL23A1Q86Y22 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC27.77■■■□□ 2.04
COL23A1Q86Y22 AP001160.3-201ENST00000601484 763 ntBASIC27.77■■■□□ 2.04
COL23A1Q86Y22 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
COL23A1Q86Y22 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.04
COL23A1Q86Y22 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
COL23A1Q86Y22 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
COL23A1Q86Y22 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.76■■■□□ 2.03
COL23A1Q86Y22 AC098590.1-201ENST00000468126 897 ntBASIC27.76■■■□□ 2.03
COL23A1Q86Y22 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC27.76■■■□□ 2.03
COL23A1Q86Y22 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
COL23A1Q86Y22 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
COL23A1Q86Y22 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL23A1Q86Y22 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL23A1Q86Y22 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
COL23A1Q86Y22 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC27.75■■■□□ 2.03
COL23A1Q86Y22 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
COL23A1Q86Y22 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL23A1Q86Y22 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
COL23A1Q86Y22 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL23A1Q86Y22 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.74■■■□□ 2.03
COL23A1Q86Y22 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
COL23A1Q86Y22 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
COL23A1Q86Y22 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC27.74■■■□□ 2.03
COL23A1Q86Y22 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
COL23A1Q86Y22 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.73■■■□□ 2.03
COL23A1Q86Y22 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
COL23A1Q86Y22 MIR4758-201ENST00000577688 71 ntBASIC27.73■■■□□ 2.03
COL23A1Q86Y22 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC27.73■■■□□ 2.03
COL23A1Q86Y22 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
COL23A1Q86Y22 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
COL23A1Q86Y22 SLC7A5P1-201ENST00000568957 537 ntBASIC27.72■■■□□ 2.03
COL23A1Q86Y22 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
COL23A1Q86Y22 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL23A1Q86Y22 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms