Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
C11orf88Q6PI97 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 C11orf96-202ENST00000528572 1834 ntBASIC18.84■□□□□ 0.61
C11orf88Q6PI97 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 AC239859.2-201ENST00000444165 318 ntBASIC18.84■□□□□ 0.61
C11orf88Q6PI97 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 AC131212.1-201ENST00000613771 668 ntBASIC18.84■□□□□ 0.61
C11orf88Q6PI97 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
C11orf88Q6PI97 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C11orf88Q6PI97 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
C11orf88Q6PI97 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 THA1P-201ENST00000590384 1145 ntBASIC18.83■□□□□ 0.6
C11orf88Q6PI97 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 FBXW4P1-201ENST00000426721 2239 ntBASIC18.83■□□□□ 0.6
C11orf88Q6PI97 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.83■□□□□ 0.6
C11orf88Q6PI97 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 AL592295.1-201ENST00000400984 884 ntBASIC18.82■□□□□ 0.6
C11orf88Q6PI97 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
C11orf88Q6PI97 AC092053.2-201ENST00000640557 1818 ntBASIC18.81■□□□□ 0.6
C11orf88Q6PI97 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 AL356441.2-201ENST00000443009 864 ntBASIC18.81■□□□□ 0.6
C11orf88Q6PI97 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
C11orf88Q6PI97 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.8■□□□□ 0.6
C11orf88Q6PI97 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms