Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 AC105265.2-201ENST00000467189 838 ntBASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.71■■□□□ 1.23
TTC39BQ5VTQ0 GUSBP5-202ENST00000510805 1989 ntBASIC22.7■■□□□ 1.23
TTC39BQ5VTQ0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TTC39BQ5VTQ0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 AP005435.1-201ENST00000529293 1178 ntBASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 AC010525.1-201ENST00000585559 441 ntBASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TTC39BQ5VTQ0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 AC068587.7-201ENST00000641602 218 ntBASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 LINC00526-201ENST00000581067 1875 ntBASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TTC39BQ5VTQ0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 LINC00565-201ENST00000562710 2331 ntBASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 IGHV3-19-201ENST00000521488 291 ntBASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TTC39BQ5VTQ0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TTC39BQ5VTQ0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
TTC39BQ5VTQ0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.65■■□□□ 1.22
TTC39BQ5VTQ0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TTC39BQ5VTQ0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.65■■□□□ 1.22
TTC39BQ5VTQ0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39BQ5VTQ0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
TTC39BQ5VTQ0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39BQ5VTQ0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39BQ5VTQ0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.64■■□□□ 1.22
TTC39BQ5VTQ0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.64■■□□□ 1.22
TTC39BQ5VTQ0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
TTC39BQ5VTQ0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TTC39BQ5VTQ0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39BQ5VTQ0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.64■■□□□ 1.21
TTC39BQ5VTQ0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39BQ5VTQ0 ZNRF2P3-201ENST00000424200 374 ntBASIC22.64■■□□□ 1.21
TTC39BQ5VTQ0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC39BQ5VTQ0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39BQ5VTQ0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
TTC39BQ5VTQ0 ECEL1P1-201ENST00000373592 1742 ntBASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms