Protein–RNA interactions for Protein: Q5TGY1

TMCO4, Transmembrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4Q5TGY1 AC106739.1-201ENST00000617035 715 ntBASIC22.46■■□□□ 1.19
TMCO4Q5TGY1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMCO4Q5TGY1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMCO4Q5TGY1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMCO4Q5TGY1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TMCO4Q5TGY1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TMCO4Q5TGY1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMCO4Q5TGY1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.46■■□□□ 1.19
TMCO4Q5TGY1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TMCO4Q5TGY1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TMCO4Q5TGY1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TMCO4Q5TGY1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 AC068587.7-201ENST00000641602 218 ntBASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMCO4Q5TGY1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 EDA-201ENST00000338901 1233 ntBASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
TMCO4Q5TGY1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 LINC00565-201ENST00000562710 2331 ntBASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMCO4Q5TGY1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
TMCO4Q5TGY1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TMCO4Q5TGY1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.39■■□□□ 1.18
TMCO4Q5TGY1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TMCO4Q5TGY1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
TMCO4Q5TGY1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
TMCO4Q5TGY1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.39■■□□□ 1.18
TMCO4Q5TGY1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TMCO4Q5TGY1 SLC47A1P1-202ENST00000449666 945 ntBASIC22.39■■□□□ 1.17
TMCO4Q5TGY1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.39■■□□□ 1.17
TMCO4Q5TGY1 AC010525.1-201ENST00000585559 441 ntBASIC22.39■■□□□ 1.17
TMCO4Q5TGY1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.39■■□□□ 1.17
TMCO4Q5TGY1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.39■■□□□ 1.17
TMCO4Q5TGY1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMCO4Q5TGY1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMCO4Q5TGY1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TMCO4Q5TGY1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TMCO4Q5TGY1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMCO4Q5TGY1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMCO4Q5TGY1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMCO4Q5TGY1 BX842568.3-201ENST00000418104 571 ntBASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms