Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.05■■□□□ 1.28
PTPN20Q4JDL3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTPN20Q4JDL3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTPN20Q4JDL3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.05■■□□□ 1.28
PTPN20Q4JDL3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 PBX2P1-201ENST00000493219 1291 ntBASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 AC106739.1-201ENST00000617035 715 ntBASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
PTPN20Q4JDL3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PTPN20Q4JDL3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTPN20Q4JDL3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.03■■□□□ 1.28
PTPN20Q4JDL3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.03■■□□□ 1.28
PTPN20Q4JDL3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTPN20Q4JDL3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTPN20Q4JDL3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 LINC00526-201ENST00000581067 1875 ntBASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 BX842568.3-201ENST00000418104 571 ntBASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTPN20Q4JDL3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTPN20Q4JDL3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23■■□□□ 1.27
PTPN20Q4JDL3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23■■□□□ 1.27
PTPN20Q4JDL3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23■■□□□ 1.27
PTPN20Q4JDL3 AC068587.7-201ENST00000641602 218 ntBASIC23■■□□□ 1.27
PTPN20Q4JDL3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTPN20Q4JDL3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTPN20Q4JDL3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
PTPN20Q4JDL3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTPN20Q4JDL3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23■■□□□ 1.27
PTPN20Q4JDL3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTPN20Q4JDL3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 AC079834.2-201ENST00000609776 1949 ntBASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 AL139246.5-201ENST00000606645 996 ntBASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTPN20Q4JDL3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTPN20Q4JDL3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PTPN20Q4JDL3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.97■■□□□ 1.27
PTPN20Q4JDL3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTPN20Q4JDL3 AP001330.3-201ENST00000520123 633 ntBASIC22.97■■□□□ 1.27
PTPN20Q4JDL3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.97■■□□□ 1.27
PTPN20Q4JDL3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PTPN20Q4JDL3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms