Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC39.17■■■■□ 3.86
HMGXB3Q12766 CYP2T1P-201ENST00000432607 1285 ntBASIC39.17■■■■□ 3.86
HMGXB3Q12766 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC39.17■■■■□ 3.86
HMGXB3Q12766 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC39.16■■■■□ 3.86
HMGXB3Q12766 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC39.16■■■■□ 3.86
HMGXB3Q12766 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC39.16■■■■□ 3.86
HMGXB3Q12766 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC39.16■■■■□ 3.86
HMGXB3Q12766 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC39.15■■■■□ 3.86
HMGXB3Q12766 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
HMGXB3Q12766 AC105036.2-201ENST00000569468 176 ntBASIC39.15■■■■□ 3.86
HMGXB3Q12766 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
HMGXB3Q12766 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC39.15■■■■□ 3.86
HMGXB3Q12766 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC39.15■■■■□ 3.86
HMGXB3Q12766 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC39.14■■■■□ 3.86
HMGXB3Q12766 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC39.14■■■■□ 3.86
HMGXB3Q12766 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC39.14■■■■□ 3.86
HMGXB3Q12766 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC39.14■■■■□ 3.86
HMGXB3Q12766 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC39.14■■■■□ 3.86
HMGXB3Q12766 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
HMGXB3Q12766 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC39.14■■■■□ 3.86
HMGXB3Q12766 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC39.14■■■■□ 3.86
HMGXB3Q12766 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC39.14■■■■□ 3.86
HMGXB3Q12766 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
HMGXB3Q12766 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
HMGXB3Q12766 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
HMGXB3Q12766 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC39.13■■■■□ 3.85
HMGXB3Q12766 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
HMGXB3Q12766 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
HMGXB3Q12766 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC39.12■■■■□ 3.85
HMGXB3Q12766 ASL-203ENST00000380839 1765 ntTSL 5 BASIC39.12■■■■□ 3.85
HMGXB3Q12766 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC39.12■■■■□ 3.85
HMGXB3Q12766 KRT18P29-201ENST00000397031 1267 ntBASIC39.12■■■■□ 3.85
HMGXB3Q12766 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC39.12■■■■□ 3.85
HMGXB3Q12766 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC39.12■■■■□ 3.85
HMGXB3Q12766 RNA5SP413-201ENST00000516373 109 ntBASIC39.12■■■■□ 3.85
HMGXB3Q12766 OXCT2P1-201ENST00000447263 1535 ntBASIC39.12■■■■□ 3.85
HMGXB3Q12766 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC39.11■■■■□ 3.85
HMGXB3Q12766 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
HMGXB3Q12766 RARRES2P4-201ENST00000514074 484 ntBASIC39.11■■■■□ 3.85
HMGXB3Q12766 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC39.11■■■■□ 3.85
HMGXB3Q12766 AC010536.3-201ENST00000620306 533 ntBASIC39.11■■■■□ 3.85
HMGXB3Q12766 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC39.11■■■■□ 3.85
HMGXB3Q12766 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC39.11■■■■□ 3.85
HMGXB3Q12766 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC39.1■■■■□ 3.85
HMGXB3Q12766 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC39.1■■■■□ 3.85
HMGXB3Q12766 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
HMGXB3Q12766 GCSHP5-201ENST00000443090 522 ntBASIC39.1■■■■□ 3.85
HMGXB3Q12766 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC39.1■■■■□ 3.85
HMGXB3Q12766 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC39.1■■■■□ 3.85
HMGXB3Q12766 AL121749.1-202ENST00000609313 2153 ntBASIC39.1■■■■□ 3.85
HMGXB3Q12766 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC39.1■■■■□ 3.85
HMGXB3Q12766 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC39.09■■■■□ 3.85
HMGXB3Q12766 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
HMGXB3Q12766 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
HMGXB3Q12766 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
HMGXB3Q12766 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
HMGXB3Q12766 MFF-207ENST00000409565 1548 ntTSL 2 BASIC39.09■■■■□ 3.85
HMGXB3Q12766 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC39.09■■■■□ 3.85
HMGXB3Q12766 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC39.09■■■■□ 3.85
HMGXB3Q12766 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC39.09■■■■□ 3.85
HMGXB3Q12766 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC39.09■■■■□ 3.85
HMGXB3Q12766 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC39.09■■■■□ 3.85
HMGXB3Q12766 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
HMGXB3Q12766 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
HMGXB3Q12766 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC39.08■■■■□ 3.85
HMGXB3Q12766 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC39.08■■■■□ 3.85
HMGXB3Q12766 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
HMGXB3Q12766 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC39.07■■■■□ 3.85
HMGXB3Q12766 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC39.07■■■■□ 3.85
HMGXB3Q12766 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC39.07■■■■□ 3.84
HMGXB3Q12766 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC39.07■■■■□ 3.84
HMGXB3Q12766 AC010141.2-201ENST00000452426 721 ntBASIC39.07■■■■□ 3.84
HMGXB3Q12766 AC145676.1-201ENST00000514988 2004 ntBASIC39.07■■■■□ 3.84
HMGXB3Q12766 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
HMGXB3Q12766 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
HMGXB3Q12766 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC39.06■■■■□ 3.84
HMGXB3Q12766 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
HMGXB3Q12766 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC39.06■■■■□ 3.84
HMGXB3Q12766 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
HMGXB3Q12766 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC39.05■■■■□ 3.84
HMGXB3Q12766 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC39.05■■■■□ 3.84
HMGXB3Q12766 AP001160.3-201ENST00000601484 763 ntBASIC39.05■■■■□ 3.84
HMGXB3Q12766 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC39.05■■■■□ 3.84
HMGXB3Q12766 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
HMGXB3Q12766 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
HMGXB3Q12766 MIR4758-201ENST00000577688 71 ntBASIC39.04■■■■□ 3.84
HMGXB3Q12766 AC083880.1-201ENST00000608266 535 ntBASIC39.04■■■■□ 3.84
HMGXB3Q12766 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC39.04■■■■□ 3.84
HMGXB3Q12766 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC39.04■■■■□ 3.84
HMGXB3Q12766 AC009237.3-201ENST00000393279 1427 ntBASIC39.04■■■■□ 3.84
HMGXB3Q12766 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC39.04■■■■□ 3.84
HMGXB3Q12766 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
HMGXB3Q12766 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC39.04■■■■□ 3.84
HMGXB3Q12766 AC013268.1-206ENST00000638368 961 ntBASIC39.04■■■■□ 3.84
HMGXB3Q12766 AC112229.1-201ENST00000639295 961 ntBASIC39.04■■■■□ 3.84
HMGXB3Q12766 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC39.04■■■■□ 3.84
HMGXB3Q12766 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC39.03■■■■□ 3.84
HMGXB3Q12766 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
HMGXB3Q12766 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC39.03■■■■□ 3.84
HMGXB3Q12766 PPP1R14BP2-201ENST00000426284 444 ntBASIC39.03■■■■□ 3.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms