Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 MIR3648-2-201ENST00000581792 180 ntBASIC18.73■□□□□ 0.59
AP3S2P59780 MIR3648-1-201ENST00000615959 180 ntBASIC18.73■□□□□ 0.59
AP3S2P59780 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.73■□□□□ 0.59
AP3S2P59780 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
AP3S2P59780 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
AP3S2P59780 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S2P59780 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S2P59780 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S2P59780 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
AP3S2P59780 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.72■□□□□ 0.59
AP3S2P59780 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S2P59780 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S2P59780 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S2P59780 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S2P59780 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
AP3S2P59780 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S2P59780 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S2P59780 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
AP3S2P59780 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S2P59780 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S2P59780 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
AP3S2P59780 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S2P59780 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S2P59780 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S2P59780 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
AP3S2P59780 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.71■□□□□ 0.59
AP3S2P59780 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
AP3S2P59780 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.71■□□□□ 0.59
AP3S2P59780 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
AP3S2P59780 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
AP3S2P59780 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
AP3S2P59780 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.7■□□□□ 0.58
AP3S2P59780 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.7■□□□□ 0.58
AP3S2P59780 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3S2P59780 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
AP3S2P59780 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
AP3S2P59780 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3S2P59780 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.7■□□□□ 0.58
AP3S2P59780 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP3S2P59780 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.69■□□□□ 0.58
AP3S2P59780 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S2P59780 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
AP3S2P59780 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S2P59780 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP3S2P59780 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
AP3S2P59780 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
AP3S2P59780 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
AP3S2P59780 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3S2P59780 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.68■□□□□ 0.58
AP3S2P59780 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.68■□□□□ 0.58
AP3S2P59780 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP3S2P59780 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.68■□□□□ 0.58
AP3S2P59780 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S2P59780 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.67■□□□□ 0.58
AP3S2P59780 AC011551.1-201ENST00000614101 683 ntBASIC18.67■□□□□ 0.58
AP3S2P59780 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S2P59780 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S2P59780 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S2P59780 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S2P59780 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP3S2P59780 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.67■□□□□ 0.58
AP3S2P59780 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
AP3S2P59780 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.66■□□□□ 0.58
AP3S2P59780 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S2P59780 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms